Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II0933 |
Symbol | |
ID | 3845221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | + |
Start bp | 1095456 |
End bp | 1097798 |
Gene Length | 2343 bp |
Protein Length | 780 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637838236 |
Product | Rhs element Vgr protein, putative |
Protein accession | YP_439130 |
Protein GI | 83716852 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.218046 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGACTA CCGGCCGATC CACGGCTACG TGCATACCGT GCGCCGACGG CGGCCTGACG TCGTGGCAAA TCGGCTTTTC GTCCGCGCTG CATTTTCTCC GGCATCGCCG CGACGAGCAT TTCTGGCTCG ACCGCGATGC GCAGGAAATC CTGTCCGAGG TGTTCAATCG CTATCCGCCG CTTCAGGGCG CATTCCGGTT CGAATTGAGC GGGGCGCTCG CGAAGCGTTC GTATTGCCGG CAGAGCGAAA CCGACTGGCA CTTCGTCAAC CGGATCATGG AAGACGAAGG GCTCTACGGC TATTGGATTC ACGACGAACG CGAGCAGAAG ACGACGCTCA GGATCGTCGA TCGCGTCGAG GCGCTGCCGG CAGCCAAGCC GATCGACTTC TATCGAGGCA ATGCCGGCGA CGAGATCGGC GGATTCACGC AATGGGCAAC GCTGCGCCAG TTGAACAGCG TGCACGTTGC CTCGCGTTCC GGCGACTACA AGCGGCCGTC GACGCCGTTC GAGGTTCGGC AGTCCGTGCA AACGACGCGC TACGTCGAGC AGACGAACTG GCGCACGCAG GAACAGAAGG CGATTCCGTA TCCGCCGCTC GAAGACTACA GCGCGGGCGC GTACCGGTAT CCGGACTCGG ACCGGGGCGC GGCGTGGGCA CGCATTCGAG CGGAGGAATA CGAGTCGCGC TCGAGGCGAT ACGCGGGAGT GGGCGGCTCG CGCTGGATCG ACGCGGGCGG CCGCTTCGTG CTGAACGATC ATCCGGCGCA TGCGGAATCC GATCCGAAGG CGCGGGAATT CGTCGCCATG GCGGCCCGCT GGACGATCGA GAACAACGTG TCGATCGCCC GTTCGAGCCG GCATTTCCCG TACAGCCTGC AAGCGGACAT CGAGCGGGCG CGTTCGGGCT TCGGTTCGGC GTTCGCGGTC GCGCCGCATC CGCAGGACGG CGCGACGGGC CTGTACGTCA TCGAGGTGGA GGCGCAGCGC ACCGATATCG AATACCGTAG CCCGTTCGAG CATCGCAAGC CGGCGATGTC GGTCGAGATG GCGACGATCG TCACGCCGAA CGGCGAGGAT GTCTGGACGG ACCCGCTGAA TCGCGTGCGC GCGCGCTTCC ATTGGGATCG GCAGAGTCCG CCCGACGCGT TCGAGACGTC GCCGCCGCTG CTGGTCGCGC AATCGGATAC CGGGCCGCAG TACGGCGGCG TGCACGTGCC GCGACGCGGC GAGACCGTCT ATGTGGATTT CGTCGGCGGC GACTGCGACC GCCCGTACAT CGTATCGCGC GCGCCGGGCG GGGCGACGCC GCCGATGTGG CATTCGGACG GGCTGCTGTC GGGCTTCCAG TCGCGCGAAT ACGGTGGCGG CGGCGGTTAC AGCGAGATGC AGCTCGACGA CGCGACCGGG CAGGTGCGCG CCCGTGTGCT GAGCAAGACG CGGGGCGACT ACAGCCATCT GACGCTCGGC TACGGGATCG TACAGCAGGG CAACACGCGC GGCCGCTATC TCGGCTCGGG CTTCACGCTG CATGCGGACC AATACGGCGC GGTTCGCGCC AATCGCGGCC TGTACATCGG CACGCACGCG ACTCGCCACG ACGCCGAGCA ACTGGACGTG GACGCGGCGC GCGATCAACT GAAGGCCGCG GCGGACGTGC TCGCGCGGCA GTCGTCGCTG AGCGAGCAGC ATCGGGCGGA GAGTCTGAAG GCGGGGCACG ACGCGCTGAC GGAACTGACC GACGCGACGC GGCAGCCGGT CGAGCCGGGC GCGAGCGGGG GGCGCACGTC GGGCGGCGGG ACGGGCAGCG CGAACGGCTT CAAGGTGCCG GCGATGCTGC TCGGCAGCGC GGGCGGCATG GGGCTGACGA CGTTTCAGTC GCTGCACGCG TCGGCGGATC GGCACGTGAA CGTCGTGGCG GGTCAAAGCG CGTTCGTCGC GACGGGGAAG TCGTTCGTGG CGAGCGCGGG CGAGAAGGTC AGCGTGTTCG CGCAGAGCGG GATCAAGCTG TTCTCGAAGG ACGCGGTTCA GATCGAGTCG CATCGCGAGA CGATCGACCT GATCGGCCAG AAGACGGTGC GGATCGTGTC GGCGACGGAG CGCATCGAGA TCGCGGCGGA CAAGGAGATA CTGATCACGT CGGGGCAGGC GTACATCCGC CTGAAGGGCG GCGACATTCA GATCCATGCG CCGGGCAAGA TCGACATCAA GGGGAGCCTG CACAACTTCT CGGGCCCGGC CAGCATGCCG TATCCGATGC CGACGCAGCC GGATGCGGTG TGCGTGCCGT GCATGATGAA GCAGGCGGCC GGGCGCGGCG CGTTCGTGGC GATGGGGGCG TGA
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Protein sequence | MPTTGRSTAT CIPCADGGLT SWQIGFSSAL HFLRHRRDEH FWLDRDAQEI LSEVFNRYPP LQGAFRFELS GALAKRSYCR QSETDWHFVN RIMEDEGLYG YWIHDEREQK TTLRIVDRVE ALPAAKPIDF YRGNAGDEIG GFTQWATLRQ LNSVHVASRS GDYKRPSTPF EVRQSVQTTR YVEQTNWRTQ EQKAIPYPPL EDYSAGAYRY PDSDRGAAWA RIRAEEYESR SRRYAGVGGS RWIDAGGRFV LNDHPAHAES DPKAREFVAM AARWTIENNV SIARSSRHFP YSLQADIERA RSGFGSAFAV APHPQDGATG LYVIEVEAQR TDIEYRSPFE HRKPAMSVEM ATIVTPNGED VWTDPLNRVR ARFHWDRQSP PDAFETSPPL LVAQSDTGPQ YGGVHVPRRG ETVYVDFVGG DCDRPYIVSR APGGATPPMW HSDGLLSGFQ SREYGGGGGY SEMQLDDATG QVRARVLSKT RGDYSHLTLG YGIVQQGNTR GRYLGSGFTL HADQYGAVRA NRGLYIGTHA TRHDAEQLDV DAARDQLKAA ADVLARQSSL SEQHRAESLK AGHDALTELT DATRQPVEPG ASGGRTSGGG TGSANGFKVP AMLLGSAGGM GLTTFQSLHA SADRHVNVVA GQSAFVATGK SFVASAGEKV SVFAQSGIKL FSKDAVQIES HRETIDLIGQ KTVRIVSATE RIEIAADKEI LITSGQAYIR LKGGDIQIHA PGKIDIKGSL HNFSGPASMP YPMPTQPDAV CVPCMMKQAA GRGAFVAMGA
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