| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0863 |
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| Symbol | |
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| ID | 3844580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | - |
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| Start bp | 1009425 |
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| End bp | 1012463 |
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| Gene Length | 3039 bp |
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| Protein Length | 1012 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637838166 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_439060 |
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| Protein GI | 83717090 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0201208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCGT CCCATCGACA CTACGCCGAC ACGGCGCTCG CGGATGTCGC GGCGCTCACG
GATGCCGCGT CGCGCGCCGA CGCCGCGCCG CTCGCGAACG CGCGACGCTT CACGTTCGCG
AGCACCGCGT ACGACGCTGC CACGTTCGAC GTCGTCGACA TCGACGGCCG CGACGCGATC
TCGCAGCCGT ACCGGTTCGA GATCACGCTC GTGAGCAGGA GTGTGCGGAT CGACTTCGCG
AAGATGCTGA GTTGCGAGGC GACGCTCGCG ATCCTGCCGC CGTTCGGTGA GGCCGGCACG
ACCCGCTATG CCGGCGTGCT CGCCGAATTC GAGCAGAAGG AACGCTTTCG CGACTTCACC
GTCTATCGCG CGGCGCTCGT GCCGCGCCTC TGGCGCCTCT CGCTGTACAA GGCGTCGGAC
GTCTACCTGA ACGAGCAGAC GATTCCCGAT ATCGTCAAGC GCGTGCTGCG CGCCGCGTCG
TTCGGCAAGC GCAATTTCCG CATGCGGCAC CGCGGCGTCT ACCGCAAGCG CAGCTTCGTC
TGCCAGTACG ACGAGAGCCA TCTCGATTTC GTGTCGCGCT GGATGGAGAA GGAAGGCCTC
TACTACTACT TCGAGCATGA CGGCCGACGC GAAAAGCTCG AGATCGTTGA CGACCGCCGC
GACCAGCCCG GCCCCGCCGA CGATCTCGCG CTGCGCTACC TACCCGCCAC CTGTCTCGAC
GCGGGCATCG AATCGGACCG CGTGCAGGCG TTCGCATGCC GCGCGACGCC GCTGCCGCGC
GAGGTCGTGC TGCGCGATTT CAACCACCGC AAGGCGGAGC TGTCGCTCGA AGTCCGCGAG
CACGTGGCGC ACGACGGCGT CGGCGAGCGG GTATCGAGCG ACGAGCATTT CCACACGAAG
GACGAAGGGC GGCGCTACGC GAAGCTGCGC GCCGAGGCGC TCGTTTGCGA AGGCCGCCGT
TTCGCCGGCG AATCGACCGC GGCCGGGCTG CGCGCGGGCC GCTTCTTCGC GCTCTCGGGC
CACTACCGCA AGGACTTCGA CGGCCGCTAT CTGGTGACGG CGGTCACGCA TCGCGGCTCG
CAGGCGCACC TGCTGTTTCC CGATCTCGAC GCGCCGTTCG GCGCGACGCC GGGCGAGCCC
GTCTACCGCG CCGAGTTCGA GGCGATCGCC GCCAACCTCC AGTACCGGCC GCCGCGCACG
ACGCCGAAGC CGCGCGCGGC GGGCGTCGTC AGCGCGATCG TCGACGGCGA GGGCAGCGGC
AAGCGCGCCG AACTCGACGA ACACGGCCAG TACAAAGTGC GCTTTCCGTT CGCGCACACC
GCGCATCCGA CGAACAAGGC CTCCGCGCGC ATCCGGATGG CGACGCCCTA TGCGGGCGAC
GACCGCGGCA TGCATCTGCC GCTTCTGAAG CGCACCGAAG TGAAGATCGC ATTCGACGGC
GGCGATCCGG ACCGCCCCGT GATCGTCGGC GCGGTGCCCA ACTCGTCGCA CCGCAGCGTC
GTCACGCGCA GCAACCCCGA CGCGCACCGG ATCCTCACCG AGCACAACCA GCTCTACATG
AAGGACGGCA GCGGCGCGGC GACGTGGCTG CACGCGCCGA ACAACCACAT CGGCATCGGC
GCGGTCGGGC CGGGCGACGG CCTCGCGCTC CTCACGTCCG GCAACAAGTT CGATTTCTCG
CTCGGCAACG CGTACAGCTT CTCGGGCGGG CTCAAGTGCT CGGTGTCGAT GGGCGGCAAC
ACCGACATCT ACGTCGGCGT GCGCAACAGC CTCGACGTCA GCGCGAACTT CCTGACGACG
CTGCAGGGCA ACCTGCGCTG GATGCTGCCC GGCAGCCGAA GCTTCGAGAT CAACGACAGC
GCGTCCACGC TGCTGCAGAC GCTGCACAAG CAGTCCGCGA CGGGCGCGAT CCGGCTGTCC
GCCGGGCAGG ACGCGTCCGC GCTGCTGCAA AAGCAGCTCG ACAAGCTCAA GGGCACGGTG
CGCAAGTTCA TGATCGTGTC GGGCCTCGCG AACGCCGGAG CCGCGGCCAC CGCTGCGGGG
CTCATCAAGG GCGGCGGCGC GCTCGCCGAT CTGCCGTGGG CGGGCTTCGG CGTGTCCGCC
GCGCAGTTCG CCGGCGCGAC CGGCTTCAGC ACGGCGCTGA TGGCGACCTC GCGCACGCTG
CTCTCGAAAA TCGCGAAGCT CCAGGAGGCG TTGCCGCTCG TCGCCGATCT ATCGCTCGAC
AAGCAAGGCA TCGCGCTCGC GGCGAAGAAC CTCACGCACG CGACGCGGAT GTCGCTCACC
GTCGACGGCG TCTCGTGGTC GACGCACGCG AAGGGGCCGG GCGCGGCAGG CGCCGCGATG
AGCGTCGGCA AGGGCCGCTG GGGCGTCGAA GCGGCGGAGC ACGCGCATGT CCACGCGAAT
GACACGCTGC TGTTCGCCGT GCCGGCCGAC CCAACGAGCA AGTTCGACCT CAAGGAGCTG
ATCGGGCTGC GCCGCGATCT CGACGAATGC GTGAAGGGTA TCGCCGATCT CGAAGCCGAC
ATTTCGGAAA ACGAAGTGCT TTCGACCGAT CAGAACACGT TCGGCGTCGG CGCGCTCGTG
CCCACGCCGC CGTCGCCCGC CAATGCGGTC GCGGCGGTCG CGATCAAGGC GAAGGAAGCG
AAGCTCGTCG AGCTGAACGC CAAACGCAAG CTCGTCGCGA CGAAGATCGA CAACCTCCAG
CAGAAGCTCG CGAAGCACGC GAAGAACCTG AGCGCCGCGC GGATGAGCGC GTCGGACGCG
GAAGTCGGCT TCAAGGGCAA CCGGCTCGTC GCGACGGCCG AAGGCGTCAC GCTCGCGCAT
GCGCAGGGCA AGGCGAAGCT CGACGTGCGC GAGGCGAAGA TCGGCGTCGA GGCAGGCAAA
TCGAGCCTCG AGCTCGACGA GAGCAAGCTC GCGGCCGGCT GCGGCGGCGC CTCGCTGAAG
CTGGGCAGCG ACGGCGCGAT CGACGTGCGC GCGACTAACG TCAAGCTGAA CGGCAGCGCG
TCGCTGAAGC TCGACGGACA GTTGATCCAG CTAGGCTGA
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| Protein sequence | MSSSHRHYAD TALADVAALT DAASRADAAP LANARRFTFA STAYDAATFD VVDIDGRDAI
SQPYRFEITL VSRSVRIDFA KMLSCEATLA ILPPFGEAGT TRYAGVLAEF EQKERFRDFT
VYRAALVPRL WRLSLYKASD VYLNEQTIPD IVKRVLRAAS FGKRNFRMRH RGVYRKRSFV
CQYDESHLDF VSRWMEKEGL YYYFEHDGRR EKLEIVDDRR DQPGPADDLA LRYLPATCLD
AGIESDRVQA FACRATPLPR EVVLRDFNHR KAELSLEVRE HVAHDGVGER VSSDEHFHTK
DEGRRYAKLR AEALVCEGRR FAGESTAAGL RAGRFFALSG HYRKDFDGRY LVTAVTHRGS
QAHLLFPDLD APFGATPGEP VYRAEFEAIA ANLQYRPPRT TPKPRAAGVV SAIVDGEGSG
KRAELDEHGQ YKVRFPFAHT AHPTNKASAR IRMATPYAGD DRGMHLPLLK RTEVKIAFDG
GDPDRPVIVG AVPNSSHRSV VTRSNPDAHR ILTEHNQLYM KDGSGAATWL HAPNNHIGIG
AVGPGDGLAL LTSGNKFDFS LGNAYSFSGG LKCSVSMGGN TDIYVGVRNS LDVSANFLTT
LQGNLRWMLP GSRSFEINDS ASTLLQTLHK QSATGAIRLS AGQDASALLQ KQLDKLKGTV
RKFMIVSGLA NAGAAATAAG LIKGGGALAD LPWAGFGVSA AQFAGATGFS TALMATSRTL
LSKIAKLQEA LPLVADLSLD KQGIALAAKN LTHATRMSLT VDGVSWSTHA KGPGAAGAAM
SVGKGRWGVE AAEHAHVHAN DTLLFAVPAD PTSKFDLKEL IGLRRDLDEC VKGIADLEAD
ISENEVLSTD QNTFGVGALV PTPPSPANAV AAVAIKAKEA KLVELNAKRK LVATKIDNLQ
QKLAKHAKNL SAARMSASDA EVGFKGNRLV ATAEGVTLAH AQGKAKLDVR EAKIGVEAGK
SSLELDESKL AAGCGGASLK LGSDGAIDVR ATNVKLNGSA SLKLDGQLIQ LG
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