| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3780 |
|---|
| Symbol | |
|---|
| ID | 3837237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 4328991 |
|---|
| End bp | 4329782 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637827905 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_428861 |
|---|
| Protein GI | 83595109 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2740] Predicted nucleic-acid-binding protein implicated in transcription termination |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0580173 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGATC CGATGGACGA TCCCGCCCTG GACGACGACT CCGCCGACGA CACGGCGCCG
CCCGCCTCCG GGAAGCGTGT GCCCGCCGAC GATCGCGAGC CCGAAGGGCC GAATCGACGG
TGTATTCTGA GCCGGGCGGT TCGCCGACGC GAAGCGATGT TGCGCTTCAT CGTCGCTCCG
GACGGGCTTG TCGTGCCTGA TCTCGACGCG CGCCTGCCCG GCAGGGGTTT ATGGTTGAGC
CCGGGGCGCG ATGTGGTAGA AACGGCGGCG GCCAAGGGCG TCTTCGCCCG GGCCGCCAAG
CGGGCCGTCG TTTTGCCGCC CGATTTGGCC GAACGGGTCG ATCGCCTGCT CGAAGAGCGC
TGCGTCGATC TGGTCGGTCT GGCCCGCAAG GCTGGGCAGG CGGTCGCCGG TTTCGAGAAG
GTGAAGTCCT GGGTTCATAC GGGACGGGCC GGAATGGTGC TCGAGGCGTG GGACGGCAGC
GAAGGCGGCC GGGCCAAGCT GGGCGCCGAG ACCTGGGGTA TGCCGGTTTT CAGGGCCATG
GATCGTTTGG CTCTGGGCCG CGCTTTCGCC AGGGAGCAAG CGGTACATGC GGCTTTGGAG
CCCGGCGGTC TCGCCCGGCG TCTGGAAGCC GATCTCATTC GTCTGGCCCG CCTGCGGGGT
CGCCTTGACG GGCAGACCGA CGCGGCGGGG ACGGACACCA AGGACGCGGA CCGCAAATCA
GGCGGTCCCC GGTCCGGCCA CTCGGGCCCG CGCGAGCGGA ACCGACGGGA CCGGAAGACC
AAACCGCTGT GA
|
|---|
| Protein sequence | MPDPMDDPAL DDDSADDTAP PASGKRVPAD DREPEGPNRR CILSRAVRRR EAMLRFIVAP
DGLVVPDLDA RLPGRGLWLS PGRDVVETAA AKGVFARAAK RAVVLPPDLA ERVDRLLEER
CVDLVGLARK AGQAVAGFEK VKSWVHTGRA GMVLEAWDGS EGGRAKLGAE TWGMPVFRAM
DRLALGRAFA REQAVHAALE PGGLARRLEA DLIRLARLRG RLDGQTDAAG TDTKDADRKS
GGPRSGHSGP RERNRRDRKT KPL
|
|---|
| |