| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3616 |
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| Symbol | hemE |
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| ID | 3837072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 4154681 |
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| End bp | 4155727 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637827740 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_428697 |
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| Protein GI | 83594945 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00257093 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGTGC CGTCCAAGAC CCAAAAGCCC TTTCTCCAAG CCCTGGCCGG CGAAACCCTG
AGTCCGCCGC CGGTATGGTT GATGCGTCAG GCTGGACGCT ACCTTCCCGA GTATCGGGCG
ACCCGGGAAG AGGCCGGTGG GTTCCTCGAT CTGTGCTACA CCCCGAAGTT GGCGGTGGAG
GTCACCCTGC AGCCGCTGCG CCGTTACGCC TTCGACGCGG CGATCTTGTT TTCCGATATT
CTGGTGGTGC CCAACGCCAT CGGTCGGCAG GTCGCTTTCA AGCAAGGCGA GGGACCGGTT
CTTGATCCGC TGACCAGCCG TGCCGATGTC GAGGCGCTTG AGCCCGGAAA ACTGCGCGAG
CGTCTGGGGC CGGTGTTTGA GACCGTGCGG GGTCTGGCGA GCGCCATTCC GTCGACGACG
GCGCTGATCG GTTTCGCCGG CGCGCCGTGG ACGGTGGCGA CCTATATGCT CGAAGGCGGG
TCGAGTAAGG ATTTCTCGGT GGCCAAATCG TGGATCTACA GCCGTCCCGA TGATTTCGCC
GCCCTGATGG AGGTGCTGAT CAGCGCCACC ACCGATTATC TGATCGCCCA GATCGACGCC
GGCGCCGAAG CCATCCAGAT TTTCGACACC TGGGCCGGCG TTCTGCCGGA AACGGAATTC
CATCGCTGGG TGATCGAGCC GATCGGCCGG ATCACCCGCG CCCTTCACGA ACAGCGCCCC
GGGGTTCCGG TGATCGGTTT TCCCAAAGGC GCCGGGGTTC TTTACGAGAC CTTCATCCGG
GAAACCGGCG TGGACGGCGT TGGGCTCGAC GCCTCGGTTC CTTTGGCCTG GGCGGCCAAG
ACCCTGCAGC CGCTGTGCAC CGTGCAGGGC AACATGGATC CCTTGCTGCT GGTCGAGGGC
GGTCCGCTGA TGGAACAGGC GGTCAAGCGC CTTCTTGATA CCCTTGGCCA TGGACCCTTT
ATCTTCAATC TCGGGCATGG CATTGTGCCG CAGACCCCTC CCGAGAATGT TGCTCGCCTG
ATCGACTTGG TTCGCGCGCC GCGTTAG
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| Protein sequence | MSVPSKTQKP FLQALAGETL SPPPVWLMRQ AGRYLPEYRA TREEAGGFLD LCYTPKLAVE
VTLQPLRRYA FDAAILFSDI LVVPNAIGRQ VAFKQGEGPV LDPLTSRADV EALEPGKLRE
RLGPVFETVR GLASAIPSTT ALIGFAGAPW TVATYMLEGG SSKDFSVAKS WIYSRPDDFA
ALMEVLISAT TDYLIAQIDA GAEAIQIFDT WAGVLPETEF HRWVIEPIGR ITRALHEQRP
GVPVIGFPKG AGVLYETFIR ETGVDGVGLD ASVPLAWAAK TLQPLCTVQG NMDPLLLVEG
GPLMEQAVKR LLDTLGHGPF IFNLGHGIVP QTPPENVARL IDLVRAPR
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