Gene Rru_A3583 details

Gene Information

• Locus tag: Rru_A3583
• ID: 3837039
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: +
• Start bp: 4125543
• End bp: 4127525
• Gene Length: 1983 bp
• Protein Length: 660 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 637827707
• Product: ATP-dependent protease-like
• Protein accession: YP_428664
• Protein GI: 83594912
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1067] Predicted ATP-dependent protease
• TIGRFAM ID: [TIGR00764] lon-related putative ATP-dependent protease

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGTTT CCCCTCTTGG CGCCCCGGCT TTGCGCCGCC CCTGCGACCC CGCCGGCCTG 
CCCTTCGAAA CCACCGCGGA TCTGACCGCG CCCAAGGGTC CGCTTGGCCA GGAGCGGGCG 
CTCGAGGCGG TGGCCTTCGC CCTCGCCATG GCGGCGCCGG GGTATAATCT GTTCTGCATG 
GGCCCCGAGG GCACGGGAAA GCGCGCCCTG ACCGGCGCCC TGCTGGCCGA GGCGGCCCGC 
CAAAAGCCCA CCCCCGACGA CTGGGTGATC CTGCACGATC CGGCCGATCC CCTGCGCCCG 
ACCCCCTTGC GCCTGCCCGC CGGGCGGGCC AAGGGGTTCC TTGCGGCCGT TGACGCCCTG 
GCCACCGATT GGACGGCCGA ATGGAGCGCG CCTGCCGCCG AAGACGGCGG CGCCGCCTTC 
GCCGATCTGC CCGATGTGGC GCCGCTCTTC GCCCGCCTCA GTCAGGACAG CGCCACCGGC 
AAGATCTGGC GGGCCGAAGC TTTGGTCAGC CACGCGCCCG GCGCGGGCGC GCCGATCATT 
CGCGAGGATA ACCCGACGCG GGCCGCCCTT TCGGGATGGG TGGAACATGT GGCCGCCCCC 
GGCGCGCCGG TGGTCAGCCT GATCCGCCCG GGCGCCCTGC AGCGGGCCAA TGGCGGCTTT 
CTACTGCTCG ATGCCCATAA GGTGCTGACG ACGCCGGGCG CCTGGGAAGA CCTCAAGCAC 
AGCCTGCGTC ACGGCCAGAT CCGCGTTGTC ACCGAAGCCG AGCGCGCCTT GGGCGCCGTG 
GCGGCGCCGA CGCCCGAGCC TTCGCCCCTG CCGCTCGCCC TCAAGGTCGT GCTGTTTGGC 
GAGCCCGATC TCTACTATGA CCTGTGGGAC AGCGACCCCG AATTCGCCGC CCTGTTCAAG 
GTCGCCGCCG ATTTCGACGA CCAGATGAAG CGCACCCCCG AAGCGGTGCT GGGCTTGGCG 
CGGGTTCTGG CCGAGGGCGG TCGCGCCGAG GACCTGCCGC CGCTTGATCG CGGCGCCGTC 
GCCCGCATCG TCGATCGCGC CGTGCGTCTG GCTGAGGATA CGGACAAGCT GACCGCGCGC 
ATGGAGCCGC TGATCGATTT GGCGCGCGAG GCCGGGTTCT TCGCCCGCCA AGACGGCGCC 
GGGGTGATCG GCCGCGACCA TGTGGAGCGC GCCCTGACCG CCCAGGAACG CCGCGAGGGC 
CGGGTCCGCG ACCTGCTGCT CGAAGAGATC CTCGACGGCA CCATCCGCGT CGAGACCACC 
GGCGCGGTGG TCGGCCAGAT CAACGGGCTG GCCGTGCTCG ATTACGGCCG CGCCAGCTTC 
GGCCGGCCCA GCCGCATCAC CTGCGCCGTG CGCGTCGGCC GCGGCGAGGT CACCGATATC 
GAGCGCGAGG TCGATCTGGG CGGGCCGCTG CACAGCAAGG GGGTGCTGAT CCTGTCGGCC 
TTCCTGTCGA CGCGCTTTTC GGTCGACGGC CTGCTCAATC TGGCGGCCAG TCTGGTCTTC 
GAGCAATCCT ATTGCGAGGT CGACGGCGAT TCGGCCTCGT CGCCCGAGCT TTACGCCCTG 
CTTTCGGCCC TGGCCGAGGC GCCGATCCGC CAGTCGCTGG CGGTGACCGG CTCGGTCGAC 
CAGTTCGGCA ATATCCAGCC GATCGGCGGC GTGAATGAAA AGATCGAGGG CTTTTTCGAG 
GTCTGCGCGG CGCGTGGCCT GACCGGCGAT CAGGGCGTGC TGATTCCGCG CGCCAATCTG 
CGCAATCTGA TGCTGCGCGA CGAGGTGGTC GAGGCCTGCG ACACAGGCCT TTTCCACGTT 
TATCCGATCG CCACCGTCGA CGAGGGCATC GCCATCCTGA CCGGGCTGAT CCCGGGCGAG 
CGCGGCCGCG ACGGCGGCTT CCCCGAGGGC TCGCTTAATC GCCGGGTCGC CCGCCGCCTG 
GAAAGCTTCG CGCGGCGCTC GCGCGAGACC TTCGATGGTC CGCCGCGACG CGGCCGACCG 
TAA 

 

Protein sequence

MTVSPLGAPA LRRPCDPAGL PFETTADLTA PKGPLGQERA LEAVAFALAM AAPGYNLFCM 
GPEGTGKRAL TGALLAEAAR QKPTPDDWVI LHDPADPLRP TPLRLPAGRA KGFLAAVDAL 
ATDWTAEWSA PAAEDGGAAF ADLPDVAPLF ARLSQDSATG KIWRAEALVS HAPGAGAPII 
REDNPTRAAL SGWVEHVAAP GAPVVSLIRP GALQRANGGF LLLDAHKVLT TPGAWEDLKH 
SLRHGQIRVV TEAERALGAV AAPTPEPSPL PLALKVVLFG EPDLYYDLWD SDPEFAALFK 
VAADFDDQMK RTPEAVLGLA RVLAEGGRAE DLPPLDRGAV ARIVDRAVRL AEDTDKLTAR 
MEPLIDLARE AGFFARQDGA GVIGRDHVER ALTAQERREG RVRDLLLEEI LDGTIRVETT 
GAVVGQINGL AVLDYGRASF GRPSRITCAV RVGRGEVTDI EREVDLGGPL HSKGVLILSA 
FLSTRFSVDG LLNLAASLVF EQSYCEVDGD SASSPELYAL LSALAEAPIR QSLAVTGSVD 
QFGNIQPIGG VNEKIEGFFE VCAARGLTGD QGVLIPRANL RNLMLRDEVV EACDTGLFHV 
YPIATVDEGI AILTGLIPGE RGRDGGFPEG SLNRRVARRL ESFARRSRET FDGPPRRGRP