| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3567 |
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| Symbol | |
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| ID | 3837023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 4111106 |
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| End bp | 4113310 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637827691 |
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| Product | uroporphyrinogen III synthase HEM4 |
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| Protein accession | YP_428648 |
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| Protein GI | 83594896 |
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| COG category | [H] Coenzyme transport and metabolism
[S] Function unknown |
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| COG ID | [COG1587] Uroporphyrinogen-III synthase
[COG4223] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGCAC TTATTACACG TCCTTTGGAA GACGCCGATC GCATCGGCGC GCTCTTGCGC
GCGCGGGGTG CCGACGTTTT TCTTGAACCC TTACTGATCA TTCTGCCGGC CGCGGCTCCC
GGCCTTGATC TGACGGACGC CCAGGCGCTG GTTTTCACCA GCGCCAACGG CGTTCGCGCC
TTCGCCGATC GCAATGCCCT GCGGCGGCTG CCGGTCTATG CCGTTGGCGA GACCACCGGC
ACGGTGGCCT CGGCCTATGG CTTTCCCGAC GTGCGCATCG CGGGGGGCGA TGTGCGGGCT
CTGGCCTCGC TGATCCTCGC CCAGGCCAGT CCCGACGCCG GACCGCTGGT TCACATCTCG
GGAACCAACG TCGCCGGCGA TCTGGCGGGC AGCCTGGGCG CCCACGGGTT TACCGTTCGC
CGGGAGCGCC TTTACGAGGC GCGGCCGGCC GCGGCTTTTT CCAAAGAGTT GAAAACCGCT
TTCGTCGAAC GATCGATGCC GGCGGTTTTC CTGTTTTCTC CACGCACCGC CAGGACCTTC
GCCGGGTTGG TCCATAAGGC GGATCTGCTT TCGGCGATGA CCGATGTCAC CGTCTACGCG
CTCAGCCCGG CCGTCGCCGA CGCCTTGGAG GGGCTCCCGC TCGGGGCCGT CCGGGTGGCG
GCCGAACCGA CTCAGGACGC GCTTCTCGGC TTGTTCGACG CCGACCTCTC GGTCGGAAGA
TCGCCAGCCG CCGCGGTCCG TGCAGAACAC CTGGAATCGA CCAAAGAAGG GGGACCCCTG
GTCATGACCA CTGGATCCAA AGAAGATCGT CCCGAGGATG GGGACCGTCC CGAGGATAAG
GCGGCCGAAA TACGGGCCGG CGACAGCGTA GTGGCGGCGG GGGCTCCGTC CTCCGGGCCC
GTGGTTGAAC CGGCCGTCGC GGCGGGAACC TCGGCGGATC AGGCTGGGGA GCGGGTCGAG
ACGGAAAGCC AGCCTTGGGG TGGCTCGAAG GCCGTGGTCG AGACCGACGA AACCGATGCC
GCCTATGGCG GATCGGCGGG CGAGGCCGGC GCCTCCGAGG CCGAGGCCGA GGAAGAGCCC
CCCAAGAAAA GCCACGCCCT GACCTATTTC GTCTTGCTGC TGCTCGTGGC CGCCGGGGCC
GCTGGATCCT ACCCCTGGTG GCGGAACGAG GTTCCCGAGG TCGTGCGGGT TTACCTGCCC
GAACTGCCCG GCGCTCCGGT CAGCCCGGAA GTCGCCGCCC TCAAGGGCTC GGTCGATGAT
TTGGGCGGCC GTCTGGCCTC GGTCGAAAGC GCCGTCGCCG ATCTGCGGGC CCAGGTCTCC
CAGGCCCCCG GCGTTCCGGC CGATATCGCC GACCGCATCA ACAGCCTGGA AGCCCGTATT
TCCGGCCTTG ACGGCCAGCC CGCTCCGGCG CCGGTCAGCG GTGGCGCCAG CGTTGACAGC
GGCGCGGTCA GCGCCCTGCA GGGCGATCTC CAGGCCACCA AGGACAGCGT CAGCGGCTTT
GACGCCAAGG TCGCCGATCT CGACAAGAAG CTGGCCGAGG TCAAGAACGA TCAGGTCGCC
CCGTCCACCG TGCTGGCCTT GGCCGGCCGG CTGACCGAGG TCGAGGGCAT CGCCCGTCAG
GCCAATACCC GGCGCAACAC GGCGCTCGCC CTGCTGCTGG CCGTTGGCCA GCTGCGCGAG
GCGGCCAACC AGGGTGAAGC CTTCGACGAT GAGCTGCGCA GCGTTCACGC CATCGTTCAG
GACGGCGCCG ATGTCGCCCC CGGCATCGAG ACGCTGACCC CGCTGGCCAC CACCGGCGTT
TCCACCCGCG CCGCCCTCGC CGCCCGCTTC GACGACGTGT CGCGCGCCAT TTCCCAGGCC
GTGCTGTCGC CCGAAGGCGA TACTTGGCTT GAGCGGACCT TTGCGGCCTT GACCAGCGTC
GTCACCGTCC GTCGCGTCGA TCAGGGCGCG GGCACCGGCG CCGAAGGGCC CTTGGCCATT
CTCGCCGAAG CCGAGCGTCT GGTTCTCGAA AACGATCTGG CCGGCGCCGT CGCGGCGCTC
AAGGGTCTGG ACGGGGCCGC CGCCGAGGCC GCTTCGCCCT GGCTGCAGGC GGCCGAGGAC
AAGCTGACGG CCGAAGCCGC GCTGTCGGAT CTGACGGCCC AGGCCCTCGC CCGCATCGGC
GCGGTGAACG CCACCGAGCC GGCCACTCCG GGCACGGAAG GGTAA
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| Protein sequence | MRALITRPLE DADRIGALLR ARGADVFLEP LLIILPAAAP GLDLTDAQAL VFTSANGVRA
FADRNALRRL PVYAVGETTG TVASAYGFPD VRIAGGDVRA LASLILAQAS PDAGPLVHIS
GTNVAGDLAG SLGAHGFTVR RERLYEARPA AAFSKELKTA FVERSMPAVF LFSPRTARTF
AGLVHKADLL SAMTDVTVYA LSPAVADALE GLPLGAVRVA AEPTQDALLG LFDADLSVGR
SPAAAVRAEH LESTKEGGPL VMTTGSKEDR PEDGDRPEDK AAEIRAGDSV VAAGAPSSGP
VVEPAVAAGT SADQAGERVE TESQPWGGSK AVVETDETDA AYGGSAGEAG ASEAEAEEEP
PKKSHALTYF VLLLLVAAGA AGSYPWWRNE VPEVVRVYLP ELPGAPVSPE VAALKGSVDD
LGGRLASVES AVADLRAQVS QAPGVPADIA DRINSLEARI SGLDGQPAPA PVSGGASVDS
GAVSALQGDL QATKDSVSGF DAKVADLDKK LAEVKNDQVA PSTVLALAGR LTEVEGIARQ
ANTRRNTALA LLLAVGQLRE AANQGEAFDD ELRSVHAIVQ DGADVAPGIE TLTPLATTGV
STRAALAARF DDVSRAISQA VLSPEGDTWL ERTFAALTSV VTVRRVDQGA GTGAEGPLAI
LAEAERLVLE NDLAGAVAAL KGLDGAAAEA ASPWLQAAED KLTAEAALSD LTAQALARIG
AVNATEPATP GTEG
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