| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3561 |
|---|
| Symbol | |
|---|
| ID | 3837016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 4102466 |
|---|
| End bp | 4104205 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 579 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637827684 |
|---|
| Product | ABC transporter, transmembrane region |
|---|
| Protein accession | YP_428642 |
|---|
| Protein GI | 83594890 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCCCGC ACCTTGGCAC CATCGCCCTG GCGGTGATGT GGATGCTGGT GCTGGCCGCC
GCCACCGTCG CCGTCGCCCA TATGCTCAAG CCGGCGATCG ACGGCATCGT CGTTGGCAGC
GATCCCCAGG CCCTGTGGGG CATCGGTCTT GGCATTCTGC TGGCTTTCGC CGTCAAGGCG
GTATCGAACT TCTTTAGTGT CGTGCTGGTG GCCAAGGCCG GGTTGGCGGC GGTGTCCGAC
GCCCGCAACC GGCTTTACCG GCATTTGTCC GAAATGGACC TGGGGTTCTT CCTGGCCCAT
TCGGCCAGCG CCCTGGCCGC CCGTTTCACC GTCGATCTGC ATCTGCTGCG TCTGGCGGTT
TCCAACGGCC TGACCAGCCT GGGCCGCGAT CTGATGACCC TGATCGGTCT GGTCGCCTAT
ACCTTCTGGG TCGATTGGCA GATGGCGCTG CTGGCCTATA TCGCCTTGCC GCTGGCGATT
TGGCCGGTGG CAAGGCTGGG CCGGCGCATC CGCCGCATCG CCGGGCGAAC CCAGCGCGAT
CTCGGCTCGC TCAACGCCCA ATTGACCCAA ACCCTGCGCG GTATCCGCAT GGTCAAGATC
TATGGCGCCG AGGAGATGGA GCGCGCCCGC GTCCACCGGC TGATCGCCGC CGTGCAGACC
CAAAGCTTCA AGGCCGAATG GACCCGCGCC TTGGTCACCC CGATCATGGA AGGGGTGGTC
GGTCTGGCGG CGGGGGCGGC GCTCTATTAC GGCGGCGCCC GCGTTCTGGC CGGCGAGGTG
ACGCCGGGCG ATCTGACCGC CTTCCTTGGC GCGGTGATGC TGGCCTATCA GCCGGCCAAG
CGCCTGGCCA ATCTGCACAC CATCTTGCAA GAAGGCTTGG CGGCGGCCGA CCGCATGTAC
CACCTGCTCG ATCTCAAGCC GGCGGTGGCC GAAGCGCCCG GGGCGCCGCC GCTGCGCCCG
GGTCCGGGAA CCGTGCGCTT TGACGATGTG ACCTTCGCCT ATGACGGCGG GCCGGGGCCG
GAACTGGGGG ATGACGCTTC CGGCCCGGCC GCCGCTCCGC CGGCGCTGCG CGGCGTCGAT
CTGACCCTGG AGGCCGGAAC GGTGGTGGCT TTGGTCGGTC CCTCGGGCGC GGGCAAGTCG
ACGCTGATGA ACCTGATCCC CCGCCTGCAT GATCCCCAGC GCGGCCGGGT GCTGATCGAT
GGCCAGGACG TGCGCGCGGT AAGCTTCGCC TCGCTGTGGG CGAGGATCGG TCTGGTCAGC
CAGGACGTGG TGGTTTTTGA CGACACCGTG CGCGCCAATA TCGCCTATGG CCGCCCCGAG
GCCAGCGCCG AGGAGGTCGA ACGCGCCGCC CGCCGCGCCG CCGCCCATGA CTTCATCGCC
GCCCTGCCCG ATGGCTATGA CACCCGGCTG GGCGAACAGG GCGTTCGGTT GTCGGGGGGG
CAACGCCAGC GGCTTTGCAT CGCCCGGGCC TTTCTCAAGG ACGCGCCGAT CCTGCTGCTT
GACGAACCGA CCGCCGCCCT CGATACGGAA TCGGAGCGGC TGGTGCAGAG CGCGCTGGCG
GCGCTGATGG CCGGGCGGAC CTGTCTGATC ATCGCCCATC GCCTAAGCAC CATCGCCGGG
GCCGACGTCA TTCATGTCAT GGCCGAGGGC GCCGTGGTCG AATCGGGCGA TCATGCCGGA
CTGCTTGCCA AAGACGGACT CTATGCCCGT CTTCACGCCG CCAATCGCCT GGGGGCCTAA
|
|---|
| Protein sequence | MRPHLGTIAL AVMWMLVLAA ATVAVAHMLK PAIDGIVVGS DPQALWGIGL GILLAFAVKA
VSNFFSVVLV AKAGLAAVSD ARNRLYRHLS EMDLGFFLAH SASALAARFT VDLHLLRLAV
SNGLTSLGRD LMTLIGLVAY TFWVDWQMAL LAYIALPLAI WPVARLGRRI RRIAGRTQRD
LGSLNAQLTQ TLRGIRMVKI YGAEEMERAR VHRLIAAVQT QSFKAEWTRA LVTPIMEGVV
GLAAGAALYY GGARVLAGEV TPGDLTAFLG AVMLAYQPAK RLANLHTILQ EGLAAADRMY
HLLDLKPAVA EAPGAPPLRP GPGTVRFDDV TFAYDGGPGP ELGDDASGPA AAPPALRGVD
LTLEAGTVVA LVGPSGAGKS TLMNLIPRLH DPQRGRVLID GQDVRAVSFA SLWARIGLVS
QDVVVFDDTV RANIAYGRPE ASAEEVERAA RRAAAHDFIA ALPDGYDTRL GEQGVRLSGG
QRQRLCIARA FLKDAPILLL DEPTAALDTE SERLVQSALA ALMAGRTCLI IAHRLSTIAG
ADVIHVMAEG AVVESGDHAG LLAKDGLYAR LHAANRLGA
|
|---|
| |