Gene Rru_A3462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3462 
Symbol 
ID3836914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp3987694 
End bp3988326 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content65% 
IMG OID637827583 
Productcold-shock DNA-binding protein family protein 
Protein accessionYP_428543 
Protein GI83594791 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTCTC GTAGCACTGC CACGGTTAAG TGGTTCAACG CGACCAAGGG TTTCGGATTC 
GTTCGCGTCA GCGACGGTGA ACCCGATGCG TTTCTTCACA TCTCTGTCCT TCAACGGGCC 
GGCTATTCGG AGTTGCCGGA AGGCGCGACG ATCGTCTGCG ATCTCGCGCC TGGCCAGAAG 
GGTATGCAGG TCAGCGAAAT CTACGAAGTC GAAGGCGGAT CGCCCGGTGG CTTCGGCGGT 
GGCGGCTATG ACCGGGGCGG TTATAGCGGC GGCTTCGACC GGGGCGGGTA CAACGGCGGC 
TTCGATCGCG GGGCCGCCGA TCGGGGCGGC TATGCCGGCG CCACCGACCG GGGTGGCTAT 
GCCGGGGGCG CCGCCGATCG CGGCGGTTAC GCCGGGGGAG CCGACAGGGG CGGCTTCCAG 
GGCGAGACCG AGATCGATGG GGTGGTCAAG TTCTTCAGCG CCGACAAGGG CTTTGGCTTC 
GTCGTCCCCG ACGGCGGCGG CAAGGATGTC TATGTCGGAT CGCGCACCTT GCAAGATTGC 
GGGGTCTCGG TTCTTGAGCA GGGCCAGCGG GTGCGCATGA GCATCCGCAT GGGCAAAAAA 
GGGCCGATGG CCGGTAGTCT CGAACTGATC TGA
 
Protein sequence
MLSRSTATVK WFNATKGFGF VRVSDGEPDA FLHISVLQRA GYSELPEGAT IVCDLAPGQK 
GMQVSEIYEV EGGSPGGFGG GGYDRGGYSG GFDRGGYNGG FDRGAADRGG YAGATDRGGY 
AGGAADRGGY AGGADRGGFQ GETEIDGVVK FFSADKGFGF VVPDGGGKDV YVGSRTLQDC 
GVSVLEQGQR VRMSIRMGKK GPMAGSLELI