Gene Rru_A3418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3418 
Symbol 
ID3836870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp3934202 
End bp3934906 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content66% 
IMG OID637827539 
ProductTetR family transcriptional regulator 
Protein accessionYP_428499 
Protein GI83594747 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.111441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAATA ATGAAGCAGA CCACCCGCGC CGGCCGCGCC GTTCGCAGGA GGCGCGCAGC 
GCCGAGACCC GGGGCAAGCT GATCGCCGCC ACCCTCGATG TGCTGTTGGC CGAAGGCTAT 
CACGCCCTGA CCACCCAGCG GATCTGTGAC GTGGCCGGGG TGTCGCGCGG CGCCATGCTC 
CATCATTTTC CAAGCAAGGT TTCGCTGGTC GTCACCGCCA TCGACCATCT GCTGACCACC 
GCCACCGAGG AGATCCGCGA TCAGGCCAAG CGGGTTCACG GCGGTGAGAT CAGCCTGGAG 
GCCTTTCTCG ATTATTTGTG GCGCGAGCAG TTTTCCGGCC GGCTGTTCTA TCTGACCTTG 
GAGCACGTCA CCCTGGCGCG GACCCATGAC GAGATCCGCG CCCCGCTGAT CCCGGTGGTC 
AAACGCTTCC ACGCGGCGCT GGACGAGACC TGGACCGAGG TCTTTCCGAC CACCAGCCTC 
GCCCCCGGCG GCATCGCCAC CGTTTTGAAC CTGACGCTTT GCTTGATGCG CGGCATGGGT 
TTGCAAACCG TGCTGCGCCC GAACGACGAC GCCTATTACC AAAGCCTGCT CTCCGCCTGG 
AAGGCCTTGT TGCCCGGCGT CGTCGAGGGC CGCTTCCCGC TGTCGCCGTC CGCGCTTTCC 
CCGCTCTCCC CCGTCCCGTC CCCGACCCCA AGGAGTGCCC GATGA
 
Protein sequence
MPNNEADHPR RPRRSQEARS AETRGKLIAA TLDVLLAEGY HALTTQRICD VAGVSRGAML 
HHFPSKVSLV VTAIDHLLTT ATEEIRDQAK RVHGGEISLE AFLDYLWREQ FSGRLFYLTL 
EHVTLARTHD EIRAPLIPVV KRFHAALDET WTEVFPTTSL APGGIATVLN LTLCLMRGMG 
LQTVLRPNDD AYYQSLLSAW KALLPGVVEG RFPLSPSALS PLSPVPSPTP RSAR