| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3417 |
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| Symbol | |
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| ID | 3836869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 3932976 |
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| End bp | 3934205 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637827538 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_428498 |
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| Protein GI | 83594746 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.498074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCC AAGTCCGTCC CCTCGCGCTG CCGCTCGTCC TCGCCGCCGG TTGCCTGCTC
GGCGCCTCCG CCCAAGCCGC CGACAAAACC ATGGTGATCG GCGCCCTGAC CCCGATCTCG
GGGGCGGGCA GCCCCTATGG CTCGGGCATG CAAAAGGCCC TTCAGGTCGG CGTCGACGAC
ATCAACGCCG CCGGTGGCGC CTGCGGCACC TCCTTGTCGG TGGTGGGCGA GGATACCCAG
ACCAGCCCCG AGGCGGCGGT TCTCGCCGTC AAAAAGCTGG TCGAGGTCAA TAAGGTTCAG
GCGGTGATGG GCACCTGGTC GTCGGGCGTC ACCCTGGCGG TGATGCCGAT CACCACGGCG
GCGGGCATTC CGCTGTTGAA CACCTCGGGG GCTCCGGCCA TTTCCACCGA CGACAAGGCC
GATCTGGTCT GGCGCTTCCA GGCGACCAAC GGCCGTTTCG GGCGCGCCTT CGCCGAGATC
GCCGATCAGG GCGGTTTCAC GCGGCCGGCG ACCATGGCCT TCAACAACGC TTCGGGCATC
GGCAATACGC AAGGCTTCGT CGAGGCTTGG AAGAAAAAGG GCAAGGATAT CGTCGCCTCG
GTGGTCTATG AGCCCAAGCA GGCCAGCTAC CGCTCGGAGC TGCAAAAGAT CCTGGCCGCC
AAGCCCGATG TCGTGGTGAT GGGGTCCTAT CTGCCCGATA CCACCATCAT CCTGCGCGAA
TGGTTCCAAA GCGGCGAGAA CCCCGATCTC AAGTGGATCA TTCCCGGCTG GGCGGCCAAT
GAAAAGCTGG TCGAGGCGCT TGGGCCGGAG GTGACCGAGG GCCTTTTGTC GGTCGACAGC
ATCAGCAACG AGAAGGCCGC CTCGCTCGAC CATTTCAACA CCGCCTTTCA GAAGGCCACC
GGCGCTTCGA CCGGCGGCAA TGTCTATGCG GCGATGACCT ATGACATGGC CGTGGTCTGG
GGATTGGCCA TGCAGGCCTC CTGCCCCGAT CTGTCGCCCA AGGCGATCAA CGCCAAGATC
CGCGCCGTCG ATGATGCGGC CGGCGAGAAG GTCTTCACCT TCGCCGAAGG CAAGGCCGCC
CTGGAAGCGG GCAAGACCAT CAACTACGAG GGGGCGTCAA GCCAGCTCGC CCTTGATGCC
TATGGCGATG TCACCCCCGA TTTCAGCCTG TCGACGATCG CCAAGGGCAA GCTTGTGCGC
AAGGGCGTGG TGTCTCTGCC CATCGAGTGA
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| Protein sequence | MTAQVRPLAL PLVLAAGCLL GASAQAADKT MVIGALTPIS GAGSPYGSGM QKALQVGVDD
INAAGGACGT SLSVVGEDTQ TSPEAAVLAV KKLVEVNKVQ AVMGTWSSGV TLAVMPITTA
AGIPLLNTSG APAISTDDKA DLVWRFQATN GRFGRAFAEI ADQGGFTRPA TMAFNNASGI
GNTQGFVEAW KKKGKDIVAS VVYEPKQASY RSELQKILAA KPDVVVMGSY LPDTTIILRE
WFQSGENPDL KWIIPGWAAN EKLVEALGPE VTEGLLSVDS ISNEKAASLD HFNTAFQKAT
GASTGGNVYA AMTYDMAVVW GLAMQASCPD LSPKAINAKI RAVDDAAGEK VFTFAEGKAA
LEAGKTINYE GASSQLALDA YGDVTPDFSL STIAKGKLVR KGVVSLPIE
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