Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3414 |
Symbol | |
ID | 3836866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 3930347 |
End bp | 3931114 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637827535 |
Product | ABC transporter component |
Protein accession | YP_428495 |
Protein GI | 83594743 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.554453 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGCG ATCGTCTGGT CATTCAGGAC ATCTATAAGG CCTTTGGCGG CGCCACCGTG CTTGAAGGCG TGACCCTGTC GGCCGCCGCC GGCGGGCTAT CGGGGTTGAT CGGCCCCAAT GGCGCGGGCA AAAGCACGCT GTTTTCCATC GTCAGCGGCT TTCAGAAAGC CGATGCCGGC GAGATCTTTT TCGAAGGCCA CGATGTCACC CGCCTCGACG TCGTCGACCG TGTGCGCCTG GGCATGGGCC GAACCTTCCA GGTGCCGCGC GAATTCGGCT CGCTCAGCGT GCGCGAGAAC CTGATGGCCG CCGCCCCCGA CCAAAGCGGC GAAAGCCTGC TTTCGGTCTT CCTGCGCCCC GGCGCCATCC GCGCCCAGGA AGCCGCGATC GCCGAGGAGG CCGACGGCTG GCTGGACTTC CTTAACCTGA GCGCCGTCGC CGATCTTCGC GCCGCCAGCC TGTCGGGCGG TCAGCGCAAG CTGCTCGAAC TAGGGCGGGT GCTGATGTTA AGGCCGCGCA TGATCCTGCT CGACGAACCC TTCGCCGGGG TCAATCCGGT GCTGATCGGC GAAATCGCCC AAAAGATCCG CACCCTTTCG GCGCGCGGCA TCGGTTTTCT GATCGTCGAG CATAATCTGG CCTCGCTGTC GGCCCTGGTC GATCACCTGT TCGTCATCGA CCGCGGCACC CTGCTGGCCG AGGGCCATCC GGCCGCCGTT CTGGCCGACC CCCGCGTGCG CGAAGCCTAT ATGGGAGGCG TGGTATGA
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Protein sequence | MNSDRLVIQD IYKAFGGATV LEGVTLSAAA GGLSGLIGPN GAGKSTLFSI VSGFQKADAG EIFFEGHDVT RLDVVDRVRL GMGRTFQVPR EFGSLSVREN LMAAAPDQSG ESLLSVFLRP GAIRAQEAAI AEEADGWLDF LNLSAVADLR AASLSGGQRK LLELGRVLML RPRMILLDEP FAGVNPVLIG EIAQKIRTLS ARGIGFLIVE HNLASLSALV DHLFVIDRGT LLAEGHPAAV LADPRVREAY MGGVV
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