Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3385 |
Symbol | |
ID | 3836837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 3902293 |
End bp | 3903021 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637827506 |
Product | OmpA/MotB |
Protein accession | YP_428466 |
Protein GI | 83594714 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.464249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGGCA ATTCGCTGTG GACGATTCTG GCCGGCGCCT GGTTGGCTGG CGGCGGCATC GCCTCCCTTG GCTTCGGTCC CGACAGGCTT CATCCGACCG CCTTGACCGG CGACGGCGGC GAGGTGCGGC TGCGCTATGC CGTGGTCGAA ACCGGAAAAC CCGGCACGGC GCTGTTTGAC GCCTATGGCG CGGCCTTGCG GCGGGCCGGA TTCGAGATTT CGCCCACTCA TCAGGCGCCC CCCCGCCTGC GCGCCCATCT TGACGGCCCC GATGGCCCCT TGCGGGCGGT GCTGACCCTT ACCCAAGACT CCGAAAGCGC CGGAACACCC CTTCATGTCT CGCTGACGGC GGCGCCGACC GATGCCGTGA CGGTGGGGGG CACGGTCACC CCACCCTCGC CGCGCCCCAG TCTTCATTTC GCCAGCGATC AGGCCGATCT TGACGACGAC GCCGGCCCTT TGCTGGCCGA GGCGGCCCGC GTGCTGAAAC AAGATCCCCG GCTGTCGCTG ATGGTGATGG GCCATACGGA CGACCGCCAC GCCCTGGATG AGGCCCTCGA CCTGTCGGCG CGGCGGGCCG AGGCGGTGGT CGCCGCCCTG GTCGAGGACC ACGGTGTCGA GCGCGGGCGC CTTGTCCCCC GGGGGGCCGG TTGGCTGGCG CCCGTGGCGT CGAACCGCAC CCAGGCCGGG CGGGCCCTCA ACCGCCGGGT CGATCTGGCC GAGATATGA
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Protein sequence | MKGNSLWTIL AGAWLAGGGI ASLGFGPDRL HPTALTGDGG EVRLRYAVVE TGKPGTALFD AYGAALRRAG FEISPTHQAP PRLRAHLDGP DGPLRAVLTL TQDSESAGTP LHVSLTAAPT DAVTVGGTVT PPSPRPSLHF ASDQADLDDD AGPLLAEAAR VLKQDPRLSL MVMGHTDDRH ALDEALDLSA RRAEAVVAAL VEDHGVERGR LVPRGAGWLA PVASNRTQAG RALNRRVDLA EI
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