| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3318 |
|---|
| Symbol | |
|---|
| ID | 3836770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 3827625 |
|---|
| End bp | 3829229 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637827439 |
|---|
| Product | gamma-glutamyltransferase |
|---|
| Protein accession | YP_428399 |
|---|
| Protein GI | 83594647 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0405] Gamma-glutamyltransferase |
|---|
| TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACCT CCAGGCTGGC CCGGCGCGGC ATGGTGAGCG CGCCCCATCA TCTGGCGGCC
CAGGCGGGGC TTGACATCCT GCGCGAGGGT GGGAACGCCA TCGAGGCGAT GATCGCCGCC
GCCAGCGCCT GCGCGGTTCT TTATCCCCAT ATGACCGGCA TCGGCGGCGA TGGCTTCTGG
ATCATCCACG AGCCCGGGCG CCCGCCGCTG TCGATCGATG CCAGCGGCGC CGCCGGGGCC
GGGGCCAGCC TTGCCGTCTA TCGCGAGCGC GGCCTTGCCC GGGTTCCCAT CCATGGCGCC
CTGGCCGCCT GCACGGTGGC CGGCGCGCTG TCGGGCTGGC AATCGGCGCT TGATGTCTCC
AGCCGCTGGG GCGGGCGCCT GCCCTTGTCG CGGCTGCTGG GCGAGGCGGT GGGCTATGCC
CGCGACGGCT TCGCCGTCTC CCATTCCCAG GAACGGGCCC TGCGCCGGCT GCTGGGCGGG
CTGAAGGATC AGCCGGGCTT CGCCGCCCAG TTCCTTGAAG CCGATGGCCG GGTTCCCCGC
GCCGGGGCGC TCCAGCGCAA TCGCCCCCTG GCCGAGACCC TGGAAACCCT GGCGGCGGAC
GGACTTGACA GCTTTTATCG CGGCGAGGTC GGCCAAAAGG TCGCCGCCGC CCTCAAGGCG
GTGGGCGCGC CGGTGACCGC GGGCGATCTC GCCCGCCACC GCTCGATCCG CCGGCGGCCC
TTGACCCTGG CCCTGGAAAG CGCCGTTCTC CATACCACGC CGCCGCCGAC CCAGGGGCTG
ACGACGCTGA TGCTGATCGG CCTGTTCCAA CGCGCCGGCT TGCGCGATGC CGAGGGCGCG
GCCTTTGTTC ACGCCATGGT CGAGGCCGCC AAGGTCGCCT ATCGGGTGCG CGACGCCAAG
ATCTGCGATC CCCGCCATAT GGGCGTTCAT CCCGCCACCT ATCTCTCGGC CCAGGTCCTT
GACGGCCTCG CCGGCGAGAT CGCCCAGGGC GGGGGGACGC CGACCCCGGC GCTGAGCGCG
GCGGGGGATA CGGTGTGGAT GGGCGCCGTG GATGGCGAGG GGCGGGCGGT CAGTTTCAGC
CAAAGCCTGT GCCACGCCTT CGGCTCGGGG GTGATGCTCG GCGACACCGG CATCCTGTGG
CACAATCGGG GCGTGGCGTT CGCGCTGGGC GACCAGGCGG TCAATCCGCT GGTCCCCGGG
CGCAAGCCGA TCCACGCCCT CAATCCGCTG CTGGCGCGGC TGCGCGATGG CAGGACCCTG
GTGTTCGGCA CCATGGGGGG GGATGGCCAG CCGCAAACCC TGGCGGCGAT CTTCGCCCGC
CATGTGCTGT TTGGCCAGGA CCCGCAGGCG GCGATCTCGG CGCCGCGCTG GCTATTGACC
GGTGGGCCGG GGGGGCGCGA CGGCTTGCCG CTGGCCGCCC TGCGTCTGGA ATCGCGCTTC
GATCCCCGGG TGGTCGAAGG CCTGCGCGCC CTTGGGCATT GCGTCACCCT GACCGATGCC
TTCGACGAGG CGATGGGCCA TGCCGGGGCG CTGATCCGCC ATCCCGACGG CACCATCGAA
GGCGCCTTCG ATCCGCGCTC CGACGGCGGT CTCGCCGGCT GGTGA
|
|---|
| Protein sequence | MLTSRLARRG MVSAPHHLAA QAGLDILREG GNAIEAMIAA ASACAVLYPH MTGIGGDGFW
IIHEPGRPPL SIDASGAAGA GASLAVYRER GLARVPIHGA LAACTVAGAL SGWQSALDVS
SRWGGRLPLS RLLGEAVGYA RDGFAVSHSQ ERALRRLLGG LKDQPGFAAQ FLEADGRVPR
AGALQRNRPL AETLETLAAD GLDSFYRGEV GQKVAAALKA VGAPVTAGDL ARHRSIRRRP
LTLALESAVL HTTPPPTQGL TTLMLIGLFQ RAGLRDAEGA AFVHAMVEAA KVAYRVRDAK
ICDPRHMGVH PATYLSAQVL DGLAGEIAQG GGTPTPALSA AGDTVWMGAV DGEGRAVSFS
QSLCHAFGSG VMLGDTGILW HNRGVAFALG DQAVNPLVPG RKPIHALNPL LARLRDGRTL
VFGTMGGDGQ PQTLAAIFAR HVLFGQDPQA AISAPRWLLT GGPGGRDGLP LAALRLESRF
DPRVVEGLRA LGHCVTLTDA FDEAMGHAGA LIRHPDGTIE GAFDPRSDGG LAGW
|
|---|
| |