Gene Rru_A3228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3228 
Symbol 
ID3836675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp3722247 
End bp3722711 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content67% 
IMG OID637827344 
Productcyclase/dehydrase 
Protein accessionYP_428310 
Protein GI83594558 
COG category[I] Lipid transport and metabolism 
COG ID[COG2867] Oligoketide cyclase/lipid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGTTC ACCACGCCGA GCGCTTCCTG CCCTTTAGCG ACCTTCAGAT GTTCACCTTG 
GTCGCCGATG TCGAACGCTA TCCCCAGTTC GTGCCGTGGT GGATCGCCGC CCGGGTCATC
GACTCCCGAC CGGCTCCGGC CGGCGACGGG CCCGATGCCA AGATCTATCG CACCGATCAG
GTGATCGGCA TGGGGCCGGT GCGCCTGCGC TTCACCTCGC GCACGCTGCT GGTGTCGCCC
CGGCGGATCT CGGTGGCGTC GCAAGGCGGC GGGCCGGTGC GCGATTTGTC CCTCGACTGG
TGGTTCGACG CCCAACCGGG CGGTTGCCTG ACCCGGCTGG ACATGACGCT TGATCTGGGT
TCGCGCAGCC TGGAGAACCT GCTGGCGGGC ATGAGTTCCG AGGCGGCGGT GAAACTGGTC
GACGCTTTCG AGCGGCGGGC CCATGCGCTT TATCAGGGCG GCTAG
 
Protein sequence
MSVHHAERFL PFSDLQMFTL VADVERYPQF VPWWIAARVI DSRPAPAGDG PDAKIYRTDQ 
VIGMGPVRLR FTSRTLLVSP RRISVASQGG GPVRDLSLDW WFDAQPGGCL TRLDMTLDLG
SRSLENLLAG MSSEAAVKLV DAFERRAHAL YQGG