| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3191 |
|---|
| Symbol | |
|---|
| ID | 3836637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 3680265 |
|---|
| End bp | 3681563 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637827306 |
|---|
| Product | dihydroorotase |
|---|
| Protein accession | YP_428273 |
|---|
| Protein GI | 83594521 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
|---|
| TIGRFAM ID | [TIGR00857] dihydroorotase, multifunctional complex type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTGC GTTCCCCCGG TCGCGTCGCC TATGTCAACG CCCGCCTGCT CGATCCGGCC
AGCGGCCTGG ATCAAACGGG CGCCCTGCTG GCCGATGGCG AGCATATCGT CGAAGTCCAC
CCCGGCGCCT TCACCGCCCC CGAGGACGCC GAGATCATCG ACTGCCAGGG GGCCTGTCTC
GCCCCCGGGC TGGTCGACAT GCGCGTTCAG CTGCGCGAGC CGGGCGAGGA ACATAAGGAA
AGCATGCGCA GCGCCGGTCA GGCGGCGGTG GCCGGCGGCA TCACCTCGAT GGTCTGCCTG
CCCAACACCA ATCCGCCGAT GGACGACGAG GCGACCTTGG AATTCGTCGC CCGCCGCGCC
CGTCTGGCCG GATTGGCCAA GGTCTATTGC TATGGCGCCT GCACCAAGGG CCTGCGCGGC
GAGGATCTGG CCGAGCTTGG CATCATGGCC GAAGCCGGGG CCCTGGCCTT CACCGATGGC
GTCAAGGCGA TCGCCAACGC CCAGATGATG CGCCGGGTGC TGGCCTATGC CGCCACCTTC
GACCTGCTGG TGATGCAGCA TCCCGAAGAG CCGACCCTGG CCGGCGGCGT GATGAACGCC
GGCGATCTGG CGACGCGCAT GGGATTGTCG GGCATTCCGC GCGAAGCCGA GATCATTTTG
CTCGAACGCG ATCTGCGGCT GGTCGCCATG ACCGGCGGAC GCTACCACGC CGCCCATATC
AGCACCGGCG AAAGCGTCGC GCTGATCCGC CGGGCCAAGG ACCAGGGCCT GCGCGTCAGT
TGCGATACGG CGCCGTTCTA TTTCGCCCTC AACGAGCTGG CCGTCGGCGA TTACCGGACC
TTCGCCAAGC TGTCGCCGCC GTTGCGCGGC GAAAGCGACC GCCGCGCCAT CATCGAGGGA
TTGAAGGACG GGGTGATCGA CGCCATCGCC TCCGATCACT CGCCCCAGGA CCAGGACACC
AAGCGCCTGC CCTTCGCCCA GGCGGCCTTC GGCGCCGTCG GCCTGGAAAC CCTGCTGTCG
ATCTCGCTCG AACTCCACCA CAACGGCCAT CTGTCGTTGC TCGAGGTGCT CAAGCGCCTG
ACCGTCGCCC CGGCCGGCCT GCTTGGCCTG GATGCCGGAC GCCTGCGCCC GGGTGGCAAG
GCCGACCTGC TGGTGTTCGA TCCCTATCGC GCCGGCAAGG TCGACGCCAC CCGCTTCCTG
TCGAAATCCA AAAACTCCCC CTTCGACGAC CGCCCGGTGC AGGGTCGCGT TCTGCGTACC
GTCGTCGATG GCCGCACGGT GTTCCCCGCC AATGGCTGA
|
|---|
| Protein sequence | MSLRSPGRVA YVNARLLDPA SGLDQTGALL ADGEHIVEVH PGAFTAPEDA EIIDCQGACL
APGLVDMRVQ LREPGEEHKE SMRSAGQAAV AGGITSMVCL PNTNPPMDDE ATLEFVARRA
RLAGLAKVYC YGACTKGLRG EDLAELGIMA EAGALAFTDG VKAIANAQMM RRVLAYAATF
DLLVMQHPEE PTLAGGVMNA GDLATRMGLS GIPREAEIIL LERDLRLVAM TGGRYHAAHI
STGESVALIR RAKDQGLRVS CDTAPFYFAL NELAVGDYRT FAKLSPPLRG ESDRRAIIEG
LKDGVIDAIA SDHSPQDQDT KRLPFAQAAF GAVGLETLLS ISLELHHNGH LSLLEVLKRL
TVAPAGLLGL DAGRLRPGGK ADLLVFDPYR AGKVDATRFL SKSKNSPFDD RPVQGRVLRT
VVDGRTVFPA NG
|
|---|
| |