| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3183 |
|---|
| Symbol | |
|---|
| ID | 3836629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 3674230 |
|---|
| End bp | 3674718 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637827298 |
|---|
| Product | diheme cytochrome c |
|---|
| Protein accession | YP_428265 |
|---|
| Protein GI | 83594513 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCACC GGCTTTTTCT TACCCTGGCG GCGATCGGCC TGGGCTTGGG ATGGACCGCG
ACGGCGCGAG CGGGGGATGA TTTCATCGCC CCGGTCAGCG ATCCCTTAAC CTTGCGCGAA
TGCGGCGAAT GCCATATGGC CTTCGCGCCC GGCTTCCTGC CCGCCCGGTC GTGGCGGGCG
ATGATGGCCG GTCTGGCCAA TCATTTCGGT CAGGACGCCA GCCTTGCCCA AGGCGATCGG
GCGGCGATCA CCGCGACCTT GGAAGCCGGG GCCGCCGATG CGCCGGGCGG GCGACGGGGC
CTTGCCGCCG AATTCCTGAG CTGGGTCGAT CCGGCGGGAA CGCCGCTGCG CCTGACCCTT
AATCCGGCCT TCCTCCACGA GCATCGCCGG GTGACGCCCG AGCGCCTGTC CGCCCGGGGC
GTCCGGTCGA TTACCGCCTG TCCGGCCTGT CACCGCAACG CCGAACGCGG CTGGTTCGAC
GACGATTAG
|
|---|
| Protein sequence | MTHRLFLTLA AIGLGLGWTA TARAGDDFIA PVSDPLTLRE CGECHMAFAP GFLPARSWRA
MMAGLANHFG QDASLAQGDR AAITATLEAG AADAPGGRRG LAAEFLSWVD PAGTPLRLTL
NPAFLHEHRR VTPERLSARG VRSITACPAC HRNAERGWFD DD
|
|---|
| |