| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3156 |
|---|
| Symbol | |
|---|
| ID | 3836602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 3646322 |
|---|
| End bp | 3648049 |
|---|
| Gene Length | 1728 bp |
|---|
| Protein Length | 575 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637827271 |
|---|
| Product | von Willebrand factor, type A |
|---|
| Protein accession | YP_428238 |
|---|
| Protein GI | 83594486 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.314115 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTATCGC CAACACTGAA GCCTGCGATG GATGCCGACT GGACCCTGCT GAGCGTGCTT
GGCAAGCCCG TTGTCCATTC CCACGACCGG CTTTCCGCGC TCCTTAGGGT TCATATCGGC
CAGGAGGCTC AGGCGCTGCT CGCCGAGCCG GTGTTCGCGG AGGCCCCCGC CGCTGATGGT
GGCGCCGACC TTCGCCGGCC GATCGGCTGG AGATCGCCGC GCGGTGGCGC GCTGACGCCG
CTGTCGGCGG CGGCCAATCC CGGCCTGTTG CGCGACCGCT TCGCCCGGCT CGAGCGCGAG
ATCACCGCGC TTTGCGCCCG TCTGTCGACC CAGGGGGAAG CCGGGCAATC GGCGGCGGAG
TCCCTGCGCC TTGCCCTGAT TACCCCCGAA GGCGGCGCGT GGCTGTATGC CGATCACGAC
CAGCCGGTTC TTGTGTGCTG GGGCCTGGGG CGGCCCGGTC AGGCGATCGC CGCCGGTGCG
GTGGGCGCGC TTTCCGGCGC GGCGCGGGCC GCCGCCGCGA GCGCTGTTTC GGGATCCGCT
GCCCCCGTCG CCCCATCGCC GGTGGGGGGA GCGGCAAGCC CGCCCCCCGC CGGATCGCCG
CCGCCGGCTG AGGGGGCTGG GTCTTCCCCC GTGGCGCCCG CGCCCGGTCG CCGAGCCTGG
ATCGCGCCGG CCCTGCTCGC CTTGGCCCTG TTGCTTTTGG CGGGCTGGCT GGCTTGGCGG
GCGCTGACGC CGCTGGCCCC GGTGATCGTC GAAGCCCCGG CGGAGGCGCC GGCCGATCTT
AGCCGTCTTG ACGATCTGGG GCGGACCCTG GCCCAGCTTG ATCAGGCCCT GGGCGAGGCC
CGCCTCGCCG AGGACGCCTT CCAGAAGGCC TGCGTGGTTC CCCCCGAACC AACGCCCGAA
CCAACCCCGG CGCCGCCGGC CGCCGCGCCC GCCCCCCAAC CCGATCCTTT GCCTGATCGC
GCCGAGGGTT CGCCGCCGCC ACCGGCCGAG GCGGCCCCCC CCGAGGTTAA ACCCGAAGCG
CCGCCGCCGG CTGCGCCAGC CAAGCCCAAA CCGCCGATAA CGGCGGCCAA GCCGCCGGCC
AAGGTCGCGC CCCCCGCCCC GGCCCCAGCC GAACCGCCGG CCCAGCCCGC CTCGCGGGCG
GCTTGCGAGC CGTCGTGGTC GCCGGGCCGC GAGCCGCGGA TGATCTTCGT CGTCGATGGC
TCGGGCAGCA TGAGCGAGGG CATCGCCGGG GCGCCTTCGC GCATTTCGGC GGCCAAGCGC
TCGATCCGCG ATACGGTGAA CGCCCTGCAC AAGGATATCC GGGTGGGCAT GGTATCGTTC
AGCGATTGCA TGGCGACCCA GAACAGCAAG TATTACTCGG CCGCCGAGCG CCCGGCCTTT
CTCGCCGGGG TCGATGCCAT CACCCCCGAA CGCGCCACCT CGCTCGCCGC CTCGATCCGT
CGCGGTGGCG CCCTGGCCAC CCGGCGCTCG GAAACCGTGA TGATGGTGGT CAGCGATGGC
GAGGATACCT GTGGCGGCGA TCCTTGCGCC GCCGCCCGCG CCGTCAAGGC CGAGAAATCC
AATGTGATCA TCCATGTCAT CGATTTGAGC GGCGGCGGCA ACAGTGGGGT CGCCCGCTGC
ATCGCTTCGG CCGGCGGCGG TCGGGTCTTC ACCCCCGGCT CGGCCGCCCA GGTGACCAGC
AGTCTGCGGA CGGCGACGGG CCAACCCGAC GCCAGCGGAT GTCAGTAA
|
|---|
| Protein sequence | MVSPTLKPAM DADWTLLSVL GKPVVHSHDR LSALLRVHIG QEAQALLAEP VFAEAPAADG
GADLRRPIGW RSPRGGALTP LSAAANPGLL RDRFARLERE ITALCARLST QGEAGQSAAE
SLRLALITPE GGAWLYADHD QPVLVCWGLG RPGQAIAAGA VGALSGAARA AAASAVSGSA
APVAPSPVGG AASPPPAGSP PPAEGAGSSP VAPAPGRRAW IAPALLALAL LLLAGWLAWR
ALTPLAPVIV EAPAEAPADL SRLDDLGRTL AQLDQALGEA RLAEDAFQKA CVVPPEPTPE
PTPAPPAAAP APQPDPLPDR AEGSPPPPAE AAPPEVKPEA PPPAAPAKPK PPITAAKPPA
KVAPPAPAPA EPPAQPASRA ACEPSWSPGR EPRMIFVVDG SGSMSEGIAG APSRISAAKR
SIRDTVNALH KDIRVGMVSF SDCMATQNSK YYSAAERPAF LAGVDAITPE RATSLAASIR
RGGALATRRS ETVMMVVSDG EDTCGGDPCA AARAVKAEKS NVIIHVIDLS GGGNSGVARC
IASAGGGRVF TPGSAAQVTS SLRTATGQPD ASGCQ
|
|---|
| |