Gene Rru_A3150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3150 
Symbol 
ID3836596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp3635171 
End bp3635893 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content68% 
IMG OID637827265 
ProductABC transporter component 
Protein accessionYP_428232 
Protein GI83594480 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCGGG TGGTTCTGCT TGATGGGGTG GTCGCCGGCA AGGGCGAGCG CTTCCGCGTG 
CGCATGAGCG GTTTTCGCGT CGGCGCCGGT GAAACCGTGG CGATCGTCGG CAAAAGCGGC
TCGGGCAAAA GTACCATCCT TGACACCATC GCTGGCATCT TGCGGCCGAT CGAGGTCAGG
GCCTTCCGGC TGATGAGCGG GGCGGCGAGC GTTGATATGG GCAAGCTGTG GGCGGCCGAT
GACCAACGCG CCCTGCGCGC CGCCCGCGCC CGCCATATCG GTTATGTGCT GCAAACCGGC
GGCCTCGCCC CCTTTCTCAG CATCGAGCAG AACATCGCGT TGCCGCTGTG GCGCGACGGC
GGACAGGATC CGGGCTGGAC CCGCCATCTG ATGGAAAAGC TGGGCATCGC CGGGCTGGCG
CGACGGCTGC CCCGCGACGT TTCGGTGGGC GAGCGCCAGC GCGCCGCCAT CGCCCGCGCC
CTGGCGGGCA AGCCCGATCT CGTGCTGGCC GACGAACCCA CCGCCTCGCT CGACAGCGCC
CAGGCCGAAG CGACCATGGC CCTGTTGACG GCGCTCGCCC GCGAAACCGG GGTGGCCCTG
CTGATGGTCA CCCATGACCG CGCTTTGGTC GAGCGCCACG GCTTTCGCAT GGCGATCTGC
CAATCCGCCG ACAACGGTCA ATCCGATCTG CTTTCCGATC CGGCTGCCGA GGGGGTGCCA
TGA
 
Protein sequence
MDRVVLLDGV VAGKGERFRV RMSGFRVGAG ETVAIVGKSG SGKSTILDTI AGILRPIEVR 
AFRLMSGAAS VDMGKLWAAD DQRALRAARA RHIGYVLQTG GLAPFLSIEQ NIALPLWRDG
GQDPGWTRHL MEKLGIAGLA RRLPRDVSVG ERQRAAIARA LAGKPDLVLA DEPTASLDSA
QAEATMALLT ALARETGVAL LMVTHDRALV ERHGFRMAIC QSADNGQSDL LSDPAAEGVP