Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3150 |
Symbol | |
ID | 3836596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 3635171 |
End bp | 3635893 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637827265 |
Product | ABC transporter component |
Protein accession | YP_428232 |
Protein GI | 83594480 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATCGGG TGGTTCTGCT TGATGGGGTG GTCGCCGGCA AGGGCGAGCG CTTCCGCGTG CGCATGAGCG GTTTTCGCGT CGGCGCCGGT GAAACCGTGG CGATCGTCGG CAAAAGCGGC TCGGGCAAAA GTACCATCCT TGACACCATC GCTGGCATCT TGCGGCCGAT CGAGGTCAGG GCCTTCCGGC TGATGAGCGG GGCGGCGAGC GTTGATATGG GCAAGCTGTG GGCGGCCGAT GACCAACGCG CCCTGCGCGC CGCCCGCGCC CGCCATATCG GTTATGTGCT GCAAACCGGC GGCCTCGCCC CCTTTCTCAG CATCGAGCAG AACATCGCGT TGCCGCTGTG GCGCGACGGC GGACAGGATC CGGGCTGGAC CCGCCATCTG ATGGAAAAGC TGGGCATCGC CGGGCTGGCG CGACGGCTGC CCCGCGACGT TTCGGTGGGC GAGCGCCAGC GCGCCGCCAT CGCCCGCGCC CTGGCGGGCA AGCCCGATCT CGTGCTGGCC GACGAACCCA CCGCCTCGCT CGACAGCGCC CAGGCCGAAG CGACCATGGC CCTGTTGACG GCGCTCGCCC GCGAAACCGG GGTGGCCCTG CTGATGGTCA CCCATGACCG CGCTTTGGTC GAGCGCCACG GCTTTCGCAT GGCGATCTGC CAATCCGCCG ACAACGGTCA ATCCGATCTG CTTTCCGATC CGGCTGCCGA GGGGGTGCCA TGA
|
Protein sequence | MDRVVLLDGV VAGKGERFRV RMSGFRVGAG ETVAIVGKSG SGKSTILDTI AGILRPIEVR AFRLMSGAAS VDMGKLWAAD DQRALRAARA RHIGYVLQTG GLAPFLSIEQ NIALPLWRDG GQDPGWTRHL MEKLGIAGLA RRLPRDVSVG ERQRAAIARA LAGKPDLVLA DEPTASLDSA QAEATMALLT ALARETGVAL LMVTHDRALV ERHGFRMAIC QSADNGQSDL LSDPAAEGVP
|
| |