Gene Rru_A3143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3143 
Symbol 
ID3836589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp3626603 
End bp3627232 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content68% 
IMG OID637827258 
Productputative aldolase 
Protein accessionYP_428225 
Protein GI83594473 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGAAG CCCTATTGCG CGACCAGATG GTCGCCCTTG CCCGCAGTTT GTTCGAGCGC 
GGCTTTTCGG TGGGAAGTGC GGGCAATATC AGCGCCCGCA CCGCCGACGG CGGCTATTTG 
ATCACCCCGA CCAATTCCAG CCTGGGCCGC TTGGCCGCCG GGCGGCTGTC AAAGCTCGAT 
AGCGCCTTCC GCCCCGTCAG CGGCGACCCG CCGTCCAAGG AGGTGGTCAT GCACCGCGCC 
TTCTATGAGG GCCGCCCCGA AGCCGGCGCC GTGGTTCATC TGCATTCGAC CATGGCGACG 
GCGATCGCCT GTCTGGCCGA GGCCGATGCC AACCAGCCGA TCGCCGCCCT GACCCCTTAC 
TTCTTCATGC GCATCGGCGC CCGCCTGCCG GTCATTCCCT ATTTCCGCCC CGGCGATCCG 
GCGATGGAAG CCGCCATCTG CGCCGAGGCC CCGACCGCCC GGGCCGTCTT GCTGTCCAAC 
CATGGACCGG TGGTCTCAGC CGCCACCCTG GTCGATGCCG TCAATGCCGC CGAGGAACTG 
GAAGAGGCGG CGAAGCTTGC CCTGCTGCTG GCCGGCAAGC CCGTTCGCAC CCTGACCCCC 
GATCAGGTCG CCGCCCTGCT TCCGCACTAG
 
Protein sequence
MDEALLRDQM VALARSLFER GFSVGSAGNI SARTADGGYL ITPTNSSLGR LAAGRLSKLD 
SAFRPVSGDP PSKEVVMHRA FYEGRPEAGA VVHLHSTMAT AIACLAEADA NQPIAALTPY 
FFMRIGARLP VIPYFRPGDP AMEAAICAEA PTARAVLLSN HGPVVSAATL VDAVNAAEEL 
EEAAKLALLL AGKPVRTLTP DQVAALLPH