Gene Rru_A3130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3130 
Symbol 
ID3836576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp3608965 
End bp3609915 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content66% 
IMG OID637827245 
ProductABC transporter component 
Protein accessionYP_428212 
Protein GI83594460 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00961649 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACGA CGCGCCGGGA CGACGCGATG AGCACGACGC GGGCGGTGAT CGCCGTTGAG 
GATCTGGTCA AGCGCTTTGG CGAGCGCACG GTGGTCGACC ACGTCAATCT TACGGTGGAT
CGCGGCAAGA TCTGCGGTTT TCTCGGACCC AATGGCAGTG GCAAGACCAC CACCATCCGC
ATGCTCTGCG GCCTGCTGAC CCCCGACGGC GGTCGGGGGA CCTGCCTGGG TCATGACATC
TTGCGCGAGA GCGACGCCAT CAAGCGTCGT GTCGGCTATA TGACCCAGCG CTTCGGCTTT
TATGAAGACC TGACGATCGC CGAGAATCTG GATTTCGTCG CCCGGCTTTA CGGACTGTCC
CAGCGCCGCC GCCGGGTGGA CGAGTCGTTG GAGTCGCTGG GGCTGACCTC GCGGCGCGCC
CAATTGGCCG GGTCGCTGTC GGGGGGATGG AAGCAGCGGC TGGCCCTTGC CGCCTGCCTG
CTCCACGAGC CCGATCTGCT GCTGCTTGAC GAGCCGACGG CCGGTGTCGA TCCCAAGGCG
CGGCGCGAGT TCTGGGATCA TATCCACGCC CTGGCCGGGC GCGGCCTGAC CGTGCTGGTC
AGCACCCATT ACATGGACGA GGCCGAGCGC TGCCATGAAA TCTACTATCT GGCCTATGGC
CGGCTGAAGG CCCACGGCAC GGTGGAACAG GTCATCGCCT CGTCGGGGCT GTCGGTCTGG
CAGGTGCGCG GCGCCAACGT CGCCGGCTTG GGCGAGCAAT TGAGCAGCGA TCCGGCGGTG
ATCTCGGTCA CCTCCTTTGG CACCACCTTG CATGTGGTCG GCACCGATCC GCGGGCCCTG
GAGCGGGTGG TCGGCCGCTA TCGCCATCTG CCCGGCACCA CCTGGACCGC CGTCGAGCCC
GGTCTGGAGG ATGTGTTCAT CCATCTGATG GAGGGGGAAT CGGGGCAGTG A
 
Protein sequence
MSTTRRDDAM STTRAVIAVE DLVKRFGERT VVDHVNLTVD RGKICGFLGP NGSGKTTTIR 
MLCGLLTPDG GRGTCLGHDI LRESDAIKRR VGYMTQRFGF YEDLTIAENL DFVARLYGLS
QRRRRVDESL ESLGLTSRRA QLAGSLSGGW KQRLALAACL LHEPDLLLLD EPTAGVDPKA
RREFWDHIHA LAGRGLTVLV STHYMDEAER CHEIYYLAYG RLKAHGTVEQ VIASSGLSVW
QVRGANVAGL GEQLSSDPAV ISVTSFGTTL HVVGTDPRAL ERVVGRYRHL PGTTWTAVEP
GLEDVFIHLM EGESGQ