Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3128 |
Symbol | |
ID | 3836574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 3607050 |
End bp | 3607835 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637827243 |
Product | AraC family transcriptional regulator |
Protein accession | YP_428210 |
Protein GI | 83594458 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.030776 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCAATC TCACGCTACC GTTCGCTTTC GTCGATGTCG CCGATGGACC GATCGTGATC GCCGCGGCCG GGAGTCAGGG GCGCGAACTG GTTTCGCCCC CCCATCACCA CGCCCGGGGG CAACTGTTCG GATCGACGCG CGGGCTGGTG TCGGTCTCCG TCGAGGCCGG GGTTTGGGTT GTCCCGGCCA TCCATGCGGT ATGGCTGCCG CCCAACCATG TCCATTGGGG CCGGTCCCAC GGGCCGTTCG ATGGCTGGAG CGTCTATATC GCCCCGGCGG CCTGCCAGGA TTTGCCAAGC AGCCCTTGCA CCATCCGCAC CTCGGGCCTG CTGCGCGAAG CGGTCCTGCG CGCCGCGACA TGGCCCCTGG AGCCCTTCGT CCCGCTCGAC GAACAGAAGG CCCATGTGGC CGCCGTGCTG CTTGATGAAA TAAGGAACCT GCCGGTCGAA CCCTTCGGCC TGCCCCTGCC CCGCGACCCG CGACTGGAGC GGATCGCCCG CGCCCTGATC GCCGATCCGG CCGATGAGCG CGATTTCGAA GCCTGGGCCC GTTGGGCGGC GATCAGTCCG CGCAGCCTGG GCCGACGCTT CGTCACCGAG ACGGGCTTCA CCTTCACCGC ATGGCGCCAA CGCGCCCGGC TGATGCGCTC ATTGGAAATG CTGGCCACCG ACCTGCCGGT GACGACCATC GCCCTGGATC TGGGCTATGC GACGGCCAGC GCCTTCATCA GCCTGTTTCG CCGCACCTTC GGGGAAACCC CGGCAGTCTA TCGCCGGCGT TTCTAA
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Protein sequence | MPNLTLPFAF VDVADGPIVI AAAGSQGREL VSPPHHHARG QLFGSTRGLV SVSVEAGVWV VPAIHAVWLP PNHVHWGRSH GPFDGWSVYI APAACQDLPS SPCTIRTSGL LREAVLRAAT WPLEPFVPLD EQKAHVAAVL LDEIRNLPVE PFGLPLPRDP RLERIARALI ADPADERDFE AWARWAAISP RSLGRRFVTE TGFTFTAWRQ RARLMRSLEM LATDLPVTTI ALDLGYATAS AFISLFRRTF GETPAVYRRR F
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