Gene Rru_A3128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3128 
Symbol 
ID3836574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp3607050 
End bp3607835 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content68% 
IMG OID637827243 
ProductAraC family transcriptional regulator 
Protein accessionYP_428210 
Protein GI83594458 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.030776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAATC TCACGCTACC GTTCGCTTTC GTCGATGTCG CCGATGGACC GATCGTGATC 
GCCGCGGCCG GGAGTCAGGG GCGCGAACTG GTTTCGCCCC CCCATCACCA CGCCCGGGGG
CAACTGTTCG GATCGACGCG CGGGCTGGTG TCGGTCTCCG TCGAGGCCGG GGTTTGGGTT
GTCCCGGCCA TCCATGCGGT ATGGCTGCCG CCCAACCATG TCCATTGGGG CCGGTCCCAC
GGGCCGTTCG ATGGCTGGAG CGTCTATATC GCCCCGGCGG CCTGCCAGGA TTTGCCAAGC
AGCCCTTGCA CCATCCGCAC CTCGGGCCTG CTGCGCGAAG CGGTCCTGCG CGCCGCGACA
TGGCCCCTGG AGCCCTTCGT CCCGCTCGAC GAACAGAAGG CCCATGTGGC CGCCGTGCTG
CTTGATGAAA TAAGGAACCT GCCGGTCGAA CCCTTCGGCC TGCCCCTGCC CCGCGACCCG
CGACTGGAGC GGATCGCCCG CGCCCTGATC GCCGATCCGG CCGATGAGCG CGATTTCGAA
GCCTGGGCCC GTTGGGCGGC GATCAGTCCG CGCAGCCTGG GCCGACGCTT CGTCACCGAG
ACGGGCTTCA CCTTCACCGC ATGGCGCCAA CGCGCCCGGC TGATGCGCTC ATTGGAAATG
CTGGCCACCG ACCTGCCGGT GACGACCATC GCCCTGGATC TGGGCTATGC GACGGCCAGC
GCCTTCATCA GCCTGTTTCG CCGCACCTTC GGGGAAACCC CGGCAGTCTA TCGCCGGCGT
TTCTAA
 
Protein sequence
MPNLTLPFAF VDVADGPIVI AAAGSQGREL VSPPHHHARG QLFGSTRGLV SVSVEAGVWV 
VPAIHAVWLP PNHVHWGRSH GPFDGWSVYI APAACQDLPS SPCTIRTSGL LREAVLRAAT
WPLEPFVPLD EQKAHVAAVL LDEIRNLPVE PFGLPLPRDP RLERIARALI ADPADERDFE
AWARWAAISP RSLGRRFVTE TGFTFTAWRQ RARLMRSLEM LATDLPVTTI ALDLGYATAS
AFISLFRRTF GETPAVYRRR F