Gene Rru_A3003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3003 
Symbol 
ID3836448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp3459992 
End bp3460642 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content64% 
IMG OID637827117 
ProductGntR family transcriptional regulator 
Protein accessionYP_428085 
Protein GI83594333 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.88449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGGGTG TGACCTATAA GACCGATCAG GCCTATGACC AGCTTGAACG GATGATCGCT 
TTTCAGGAGT TGAAACCCGG CACCATGGTT TCCGAATCGA CCCTGATGGA GCTTACCGGC 
TTTGGTCGCA CGCCGATCCG CGAGGCGCTT CAGCGCCTAG CCTGGGAGCG CATGGTCGAG 
ATCCATCCCC GGCGCGGCGC CTTCATTCCC CATATCTTCG TCGAGGTCCA ACTGAAGATC 
CTCGAGGTCC GTCGCGGGGT CGAGGAACTG GCCGTGCGCC TTGCCGCCCA GCGCGCCGAT 
GCCCTGCAAA AGGCCGATAT GGGCCGACTG GCCGGCGAGA TGGACAAGGT GATCGGCGGC 
AATGATCTGG TGACCTATGG CGATCTGCTG CGGCGGATCA ACGAGGCCAT CGTCATGGCG 
GCGCGCAACG ACTATCTGCT GCTGGCGATG GCGCCGCTGC AGGGCCTGTC CCGGCGCTTC 
TGGTTCGCCA ATGTCGGCGA CCAACAGGGC GAACTGGCCA AGGCCGCCCG CCTGCATTGC 
GCCGTCCTTG AGCACATCTG CCTGGGCGAG GCCGAGGCCG CCGCCCAGGC CTCGCTGGCG 
CTCAACGACT ATCTGACGGA TTTCGCCTAT CGCACCATCC GCCGCGCCTA A
 
Protein sequence
MSGVTYKTDQ AYDQLERMIA FQELKPGTMV SESTLMELTG FGRTPIREAL QRLAWERMVE 
IHPRRGAFIP HIFVEVQLKI LEVRRGVEEL AVRLAAQRAD ALQKADMGRL AGEMDKVIGG 
NDLVTYGDLL RRINEAIVMA ARNDYLLLAM APLQGLSRRF WFANVGDQQG ELAKAARLHC 
AVLEHICLGE AEAAAQASLA LNDYLTDFAY RTIRRA