| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2987 |
|---|
| Symbol | |
|---|
| ID | 3836432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 3439827 |
|---|
| End bp | 3440996 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637827101 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_428069 |
|---|
| Protein GI | 83594317 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02484] CitB domain protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.244128 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTCGATC CCTGTGACCT CCCCCCCCCA CCCGCGCCGG CGCCCGGCGC CTCCGCCGCC
GAGGCCGAGG CCCGCCGGGT TCTCGCCCTA TGCACTGTTT GCGGCTATTG CACCGGATTA
TGCGACGTCT TCCGCGCCGC CGAGCGCCGG CCGGCCCTGA CGTCGGGCGA TCTCGGCCAT
CTCGCCCATC TCTGCCATGG CTGTCAGGCC TGCTGGCACG CCTGCCAATA CACGCCGCCC
CATGTCTTCG CCATCGTCGT TCCCGCCACC CTGGCCCGGG TGCGGGCCGA AAGCTACGCC
CGCCATGCTT GGCCCCGCCC CCTGAAAGGA CCGGCCGTGC TGGCCCTGGC CCTGGCGGCC
ACGCTGGTCG TGCCGCTGCT TACCGTGCTG CTGGTTCCGT CGCAGGATCT GTTCGCCGCC
AATGCCGCCC CCGGGGCGTT CTATGGGGTG ATCCCCTGGG GGGTGATGAC GCCGATCGCC
CTGCTCACCC TGGGTTGGGC GGCGCTGGCC GTCGGCCTGG GCGTGGCGCG GTTCTGGCGG
GAGGGCGCCC AGGGACCGCC CGCCGCCCCG CTGGCCCGCG TCTGGGGGCG GGCCTTGGCC
GATATCGTCT CCTTGCGCAA TCTCAAGGGC GGCGGCCGGG GCTGTTTCGA GACCGACGAT
CGCCCGAGCC ATCGCCGCCG CTGGCTTCAC CATGCCCTGG CCGGCGGATT CCTGCTGTGT
TTGGGCTCGA CCCTCGCCGC GACCGTCTAT CACCATGGCC TGGGGCGCGA GGCCCCCTAT
CCTTTAACCA GCCTGCCGGT GCTGCTGGGG CTGGTTGGCG GCTGCCTGAT GGTGGGGGGG
GCGAGCGGTC TGGCCTGGCT CAAACGCCAC GCCGACCCTG AGCCCCAGGC GGCCGAGACC
CTGGGCGCCG ACCGCTGCCT GCTGGCCATG CTGATCGCGG TGGCGCTCAG CGGTCTGGTC
CTGCTCGCCC TGCGCGACAC GGCGGCGATG GGCCTGCTGC TCGCCTTGCA TCTGGGCACG
GTTCTGGGCT TTTTTATCAC CCTGCCCTAC GGCAAATTCG TCCATGGCGC CTACCGGGCG
GCGGCCTTGC TGCGCTCGGC GGCCGAACGG CGCACCGATC CGCGCGCTCC CTTGGCCGAA
AGACCGGGCG TTGATCGCGA TCTTCCGTGA
|
|---|
| Protein sequence | MFDPCDLPPP PAPAPGASAA EAEARRVLAL CTVCGYCTGL CDVFRAAERR PALTSGDLGH
LAHLCHGCQA CWHACQYTPP HVFAIVVPAT LARVRAESYA RHAWPRPLKG PAVLALALAA
TLVVPLLTVL LVPSQDLFAA NAAPGAFYGV IPWGVMTPIA LLTLGWAALA VGLGVARFWR
EGAQGPPAAP LARVWGRALA DIVSLRNLKG GGRGCFETDD RPSHRRRWLH HALAGGFLLC
LGSTLAATVY HHGLGREAPY PLTSLPVLLG LVGGCLMVGG ASGLAWLKRH ADPEPQAAET
LGADRCLLAM LIAVALSGLV LLALRDTAAM GLLLALHLGT VLGFFITLPY GKFVHGAYRA
AALLRSAAER RTDPRAPLAE RPGVDRDLP
|
|---|
| |