| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2780 |
|---|
| Symbol | |
|---|
| ID | 3836220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 3213516 |
|---|
| End bp | 3214346 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637826891 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_427864 |
|---|
| Protein GI | 83594112 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5564] Predicted TIM-barrel enzyme, possibly a dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0656358 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGTA TCGAGAGAAC GGCGCTTCTG GAAACCTTTC ACGAGATGGT CAGGCAGGGC
CGGCCGATCG TTGGCGGGGG CGCCGGCACC GGATTGTCGG CCAAATGCGA GGAGCAGGGC
GGCATCGATC TGATCGTCAT CTATAATTCC GGCCGCTACC GCATGGCCGG CCGCGGCTCT
TTGGCCGGGT TGCTGGCCTA TGGCAACGCC AATGAGATCG TGATGGACAT GGCGCGCGAG
GTGTTGCCGG TGGTCCGCCA TACCCCGGTG CTGGCCGGGG TCAACGGCAC CGATCCCTTC
TGCAATTTCG ATCATTTCCT TGATCAGGTG AAGGCCGTCG GCTTTTCCGG GATCCAGAAC
TTCCCCACCG TCGGGCTGAT CGATGGCACC TTCCGCGCCA ATCTTGAAGA GACCGGCATG
GGCTTTGGGC TGGAAGTCGA TCTGGTGCGG CTGGCCCGGG CCAAGGATCT GCTGACCACG
CCCTATGTCT TCAGCGAAGA CGACGCCCGG GCGATGACCG AGGCCGGAGC CGATATCGTC
GTCGCCCATA TGGGGCTGAC CACCGGCGGA GCGATCGGGG CGGAAACCGC CCTGTCGCTG
CACGGCGCGG CCGAGCGGGT TTCGGCGATC GCCCAGGCGG CAATCGCCGT GCGCCCGGAT
GTGATCGTGC TCTGCCATGG CGGGCCGATC GCCACGCCCG AGGACGCCCA GTTCATCCTG
GAAACCTGCC CGCAATGTCA CGGCTTCTAT GGGGCAAGCA GCATGGAGCG CCTGCCCACG
GAAATCGCCC TGACCGAGCA GACGAAACGC TTCAAGGCGA TTTCCCGCTA A
|
|---|
| Protein sequence | MARIERTALL ETFHEMVRQG RPIVGGGAGT GLSAKCEEQG GIDLIVIYNS GRYRMAGRGS
LAGLLAYGNA NEIVMDMARE VLPVVRHTPV LAGVNGTDPF CNFDHFLDQV KAVGFSGIQN
FPTVGLIDGT FRANLEETGM GFGLEVDLVR LARAKDLLTT PYVFSEDDAR AMTEAGADIV
VAHMGLTTGG AIGAETALSL HGAAERVSAI AQAAIAVRPD VIVLCHGGPI ATPEDAQFIL
ETCPQCHGFY GASSMERLPT EIALTEQTKR FKAISR
|
|---|
| |