| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2710 |
|---|
| Symbol | |
|---|
| ID | 3836149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 3131976 |
|---|
| End bp | 3133973 |
|---|
| Gene Length | 1998 bp |
|---|
| Protein Length | 665 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637826820 |
|---|
| Product | DNA topoisomerase IV subunit B |
|---|
| Protein accession | YP_427794 |
|---|
| Protein GI | 83594042 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
|---|
| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.24442 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACC TATTCCAAGA CGCGGCGGCG GCCCAACCGG CCGACGCCTA TACCGCCCGC
AGCATCGAAG TGCTGGAAGG GCTTGAACCG GTGCGTCGGC GCCCCGGCAT GTACATTGGC
GGAACCGACG AACGCGCCCT CCATCATCTG GTGGCGGAAA TCCTTGATAA CGCCATGGAC
GAGGCGGTGG CTGGCTATGC CCAGGTCATC GATATCGATC TGGCCGTCGA TGGATCCGTC
TGCGTGCGCG ACAACGGCCG GGGCATCCCG ATCGATCCGC ACCCGCGCTT CCCCGACAAA
AGCGCCCTCG AGGTCATTCT GACCACCTTG CATTCCGGCG GCAAGTTCGG CGGCGACGCC
TATAAGGTTT CGGGCGGCTT GCACGGAGTC GGCATCTCGG TGGTCAATGC GCTGTCCGAC
AGCCTGCGCG TCGAGGTCGC CCGCGACCGC ACGCTGTGGG CCCAGGATTT CTGCCGGGGC
GCGCCGCTTG GTCCCTTGCA GAAGATCGGA CCGGCGCCCA ATCGCCGGGG CACCCAGGTG
CGGTTCCATC CCGATGCCGA GATCTTCGGC CCGCGCGCCC GTTTCAAACC GGCCCTGCTC
CATCGCATGG CCCGGTCCAA GGCCTATCTG TTTCGCGGCG TGCGCATCCG CTGGAGTTGC
GCCCCCGAGC TGCTGCCCGA TGACGCCGGC GTTCCGGCCG AGGATGTCTT CCACTTCCCC
AACGGGCTGG GGGATTACCT GGGCCACGCC CTGGCCAACC GGCCGCTGGT TGGCGGACGC
ACCTTCGCCG GCACCGCCAA TCTGCCCGAC GACATGGGCA CGGTGGAATG GGCGCTGTGC
TGGCCCGAGG ACGACGAACC GTTCTTCAAT TCCTACGTCA ACACCATCCC AACCCCCGAG
GGCGGCACCC ATGAAGCCGG CCTGCGCAAC GCCCTGACGC GCGGCTTGCG CTCCTTTGCC
GAAATGTCGG GCAATAAAAA GGGCGCGGCC GCCCTGACCG CCGAGGATGT GGTCGGCGGC
GCGGCGGTGA TGTTCTCGAT GTTCCTGCGC GACCCGCAGT TCCAGGGGCA AACCAAGGAA
AAACTGGCCA GCCAGGAAGC CACCCGGCTG GTCGAACAGG CGCTGCGCGA TCCCTTCGAT
CACTGGCTGA CCGGCGCCCC CGATTCGGCC AATCTGCTGC TGACCCATGC CCTGGAGCGC
GCCGACGAAC GCCTGCGCCG CCGTCAGGCC AAGGAAACCA GCCGCAAGAC CGCCACCAAG
AAGCTGCGCC TGCCCGGCAA GCTGTCGGAT TGCACCCGCT CGACCCGCCA GGGCACCGAA
TTGTTCCTGG TCGAGGGTGA CAGCGCCGGC GGCTCGGCCA AGCAGGCCCG CGACCGCCAG
ACCCAGGCGG TGCTGCCGTT GCGCGGCAAG ATCCTCAATG TCGCCAGCGC CTCGCTCGAC
AAGCTGCGCG GCAATCAGGA ACTGTCGGAT CTGGCCGAGG CCCTGGGCTG CGGCACCCGG
GGCGCCTTTG ATCTGGAACA TCTGCGCTAC GACAAGGTGG TGATCATGAC CGACGCCGAT
GTCGACGGCG CCCATATCGC CAGCTTGCTG ATGACCTTTT TCTTCCGCGA GATGCCAGCC
CTGGTCTCGG CGGGCCATCT CTATCTGGCG ATGCCGCCGC TCTACCGCCT GACCCAGGGC
GGCACCTCGG TCTATGCCCG CGACGATGCC CATAAGGACC AGTTGATGAA GACGGTCTTC
AAGACCAAGG GCAAGGTCGA GATCAGCCGC TTCAAGGGCC TGGGCGAAAT GCCCCCCGCC
CAATTGCGCG AAACCACCAT GGCCTATGCC ACCCGTCAGT TGCTGCGGGT GACCGTGCCG
GGCGGCAAGA CCGAGGAAGA TCGCGAAGAC GCCCGCGAAA CGGCGAAGCT GGTCGAGGAG
CTGATGGGCC GCAAACCCGA ATTGCGCTTC CGCTTCATCC AGGAAAACGC CCGCTTCGCC
GAAAACCTCG ATATCTGA
|
|---|
| Protein sequence | MSDLFQDAAA AQPADAYTAR SIEVLEGLEP VRRRPGMYIG GTDERALHHL VAEILDNAMD
EAVAGYAQVI DIDLAVDGSV CVRDNGRGIP IDPHPRFPDK SALEVILTTL HSGGKFGGDA
YKVSGGLHGV GISVVNALSD SLRVEVARDR TLWAQDFCRG APLGPLQKIG PAPNRRGTQV
RFHPDAEIFG PRARFKPALL HRMARSKAYL FRGVRIRWSC APELLPDDAG VPAEDVFHFP
NGLGDYLGHA LANRPLVGGR TFAGTANLPD DMGTVEWALC WPEDDEPFFN SYVNTIPTPE
GGTHEAGLRN ALTRGLRSFA EMSGNKKGAA ALTAEDVVGG AAVMFSMFLR DPQFQGQTKE
KLASQEATRL VEQALRDPFD HWLTGAPDSA NLLLTHALER ADERLRRRQA KETSRKTATK
KLRLPGKLSD CTRSTRQGTE LFLVEGDSAG GSAKQARDRQ TQAVLPLRGK ILNVASASLD
KLRGNQELSD LAEALGCGTR GAFDLEHLRY DKVVIMTDAD VDGAHIASLL MTFFFREMPA
LVSAGHLYLA MPPLYRLTQG GTSVYARDDA HKDQLMKTVF KTKGKVEISR FKGLGEMPPA
QLRETTMAYA TRQLLRVTVP GGKTEEDRED ARETAKLVEE LMGRKPELRF RFIQENARFA
ENLDI
|
|---|
| |