| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2593 |
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| Symbol | |
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| ID | 3836028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 3013148 |
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| End bp | 3014857 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637826699 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_427677 |
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| Protein GI | 83593925 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0279465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGTGTC TCGCCACCCC GGCCACCGCG CAGGGGCGGG GCGAGGATCT GGTCGTCTCG
CGCGCTTATA TCGAGGATCC CGGCGGTGTC CTGAGCATCG ACGATGTCGT GTCGCGCGCG
GCCGTTCCCT TTGACGCGGT CTTGTCGAAG GGCTTCAGCG CGTCGGTCTA TTGGGTTCGC
CTAAGGGTGC GGGCGCCTGA AGCGGGCGCT CGGACGGTCT TGCTGATCAG TCCGAGTTTT
CTCAACGATG TGCGCCTTTT TCGGCGTGAT CCCAAGGCCG CCCAGGGATG GGAAGTCCGG
GTGACGGGAA ACCTACATCC TTTCGCCGAG CGGGAGCGCA AGGCCGTCTC CCTCAGCTTT
GTCGTTGGCG TCTCTCCGCC GCAAGAGGAT TTTTATTTCC GTATAAAAAC CAGAAGCCCA
ATGACTTTCG AGGTGCAGGC TCTCTCAGTG GAGGATGCCA ATGAGCAAGA TTATTGGCGG
GACATTATCG AAGTTTTCTT TGTAACATCC ATGGTCTTAT TATTGATTTG GGGCGTTCAT
CAATATTTTA TAGATAAGCA GAAAATTTTA ATTTTATTTT GTATTTATCA GATAGTTTAT
ACATTGTATG GTATCGCTTT GACGGGGTAT TTCGCTTCCT TATCGACGCG GTTTTTTCCA
GAGTTGATCG ACCTGATTAA CGCCATAATA TATATATCTG CCGTGCTAAC ATCTGTTTTG
TTTTGTCGTG AAATTTTCAG ACCCTATAAG CCTCATCCGC TTCTTATGAA GGGATTTTTG
GTTTTTATTT TGGCCTTTCC TTTTCAGATG ATCGCCATGG TGGCGGGATA TTCTGATTTG
GCGATCATCA GTGCCGCTTT GTTGATGAAG CTGGCCGTTT TCTATTACGT CATCGTCGCT
TTTTCCCTTA AGAAAGATCT GTTCCCGACG AGAAACATGC TGAGGCTGTT TTTCCTGTCG
ATGGCGGTGG CCAATGGGGC GTTCTGGGCC GGCGCGCGGT TGGTTGACGA TGTGCGGGCG
ATGAGCCTGA TCGGGGTTCA GTCGTTGATC GTCGACGGTT TTGTCGTCGG CGTCTTCTTC
GCGTGGCTGG TGCATGGTCG GAGCCAGTAC GGCCGCCGGG AAACCGAACG GCAATTGCAC
ATGATCCGGC AAGCCTATGA GGTCGAGCAG GAGCGCAAGA GGCAGGCCGA GTGGGAGGCG
CGAACCGATT TCCTGACCGG GCTTTTGAAT CGGCGCTCTT TTGTCGATCT GGCCGAGAGG
GAACTGGCCC GCTCGCTGCG CTATCAGCGA CCGTTCACCT TGCTGATGAT CGACGTCGAT
CATTTCAAGG CGGTCAACGA CACCCGGGGT CATCTTGTCG GCGATGTGGT TTTGCAAAAC
GTCGCGCGGC GGATCAAGGA GACCTTGCGC CTGATCGATA TCTTTGGCCG CACCGGGGGC
GAGGAATTCG CCGCCGTGAT CGTCGAGACG GGCGGGCCCG AGGCCCTGGA GATCGCGCGG
CGGCTTTGCG CCGTGGTGGC CCGGGACGAG ATCGTTCAGC CAGAGGGCGA GCCGATCGGC
GTGACCATCT CGATCGGCCT TACCCGGTCG AATGGTCGAT CCATCTCCTT TAGCGCCCTG
ATGAACGAGG CCGATCAGGC CCTGTATGCG GCCAAACGGG CCGGGCGCAA TCAGGTGGTG
ATCAGTCAGC AGGCCTTGGG CGCGCCCTGA
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| Protein sequence | MVCLATPATA QGRGEDLVVS RAYIEDPGGV LSIDDVVSRA AVPFDAVLSK GFSASVYWVR
LRVRAPEAGA RTVLLISPSF LNDVRLFRRD PKAAQGWEVR VTGNLHPFAE RERKAVSLSF
VVGVSPPQED FYFRIKTRSP MTFEVQALSV EDANEQDYWR DIIEVFFVTS MVLLLIWGVH
QYFIDKQKIL ILFCIYQIVY TLYGIALTGY FASLSTRFFP ELIDLINAII YISAVLTSVL
FCREIFRPYK PHPLLMKGFL VFILAFPFQM IAMVAGYSDL AIISAALLMK LAVFYYVIVA
FSLKKDLFPT RNMLRLFFLS MAVANGAFWA GARLVDDVRA MSLIGVQSLI VDGFVVGVFF
AWLVHGRSQY GRRETERQLH MIRQAYEVEQ ERKRQAEWEA RTDFLTGLLN RRSFVDLAER
ELARSLRYQR PFTLLMIDVD HFKAVNDTRG HLVGDVVLQN VARRIKETLR LIDIFGRTGG
EEFAAVIVET GGPEALEIAR RLCAVVARDE IVQPEGEPIG VTISIGLTRS NGRSISFSAL
MNEADQALYA AKRAGRNQVV ISQQALGAP
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