| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2542 |
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| Symbol | |
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| ID | 3835976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 2955554 |
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| End bp | 2957236 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637826650 |
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| Product | circadian clock protein KaiC |
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| Protein accession | YP_427629 |
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| Protein GI | 83593877 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
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| TIGRFAM ID | [TIGR02655] circadian clock protein KaiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGGAC CCGCTGGCAT TAGAAAATCA CGCACCGGCA TTGCCGGCTT CGATGAACTC
ACGCTTGGCG GTTTGCCAAC CGGCCGGCCA ACCCTAGTCT GCGGCTCGGC GGGATGCGGC
AAAACGCTGT TTGCCGCCAC CTTCCTTGTC CATGGGGTCA AGGATTTCGA CGAACCGGGC
GTCTTCGTCA GCTTCGAAGA GCGCCCGGTC GATATCATCG ACAATGTCGC ATCGCTGGGC
TTCCACCTTG ACGATTTGAT CGAGGAGGGC CGGGTGGTTA TCGAACATAT CGCCGTCGAC
CCTTCGGAAG TCGCCGAAAT CGGCGATTAC GATCTCGAGG GCCTGTTTCT CCGCCTGGAA
TTGGCCATCG ACACCATCGG CGCCAAACGG GTGGTTCTTG ATACCATCGA AAGCCTGTTC
TCGGCCTTTT CCAATCCGGC CATCCTGCGC GCCGAGATCC GCCGCCTGTT CGACTGGCTC
AAGGAAAAGG GGATGACCAC CGTCATCACC GGCGAGCGCG GCGAAGGCTC GCTAACCCGC
CAGGGCCTGG AAGAATATGT GTCCGATTGC GTCTTGCTGC TCGATCACCG GGTCGAGAAC
CAGATTTCAA CCCGCCGCCT GCGCATCGTC AAATATCGCG GCACCAATCA CGGCACCAAT
GAATATCCCT TCCTCATCGA CGAGGATGGG TTCAGCGTTC TTCCCGTCTC CGCCCTGGGC
TTAAGCCATA AGATCTATGA CGAGCGGATC TCCACGGGCG TGGCCGATCT CGACGCGATG
CTGAGCGGCG GCGGCTTCCA CCGGGGATCA AGCATCCTGG TCTCGGGTGT CGCCGGATCG
GGCAAATCAT CGCTCGCCGC CAGTTTTGTC GATGCGACCT GCCGGGCCGG CGAAAGCGTG
ATCTATTTCT CCTTCGAGGA ATCGCACGAG CAAGCGACCC GCAACATGAA ATCGATCGGT
ATCGATCTTG GCCAATGGAT GGCGAGCGGG CAACTGAAGT ACATCGCGAC GCGACCGACC
TTCTATAGCC TGGAAATGCA TCTGGCGATC GTCTTGCGCG AGGTGATCAA ACTGAAGCCA
AGCTTGGTCA TTCTCGATCC GATTTCCGCC TTCACCGAAA GCGGCGAGCG CCTGGAGGTC
CAGGGCATGC TGCTGCGGAT CGTCGACTTC CTGAAGTCGC GCGGCGTGAC CGGGGTTTTC
ACCCATTTGA TGCAAAGCGG CGACAACCTT ATAAAAACCG ATGCCGGGCT TTCATCGTTG
ATGGACGCCT GGATCCTTTT GCTGAATCGG GAAGTGAACG GCGAATTCAA TCGAGAGCTT
TATCTTCTCA AGGCGCGCGG CATGGAGCAT TCCAATCAGG TCCGCGAATT CGTGATGAGC
CGATCGGGTA TCTCGTTGCT GCCCCCCTAT ATTGGGGAAG GCGGGGCGCT GACCGGCTCG
GCCCGCAAGA TCGAGGAGGC CCGTCAGGCG CGGCTGGAAA CCGAGCGGCG GATCGAGGCG
GCGCGGCTCA AGCGCGAGAT CGAGCAACGA CATCGGCGCA ATCGCGCCCA GATCGACCTG
CTTCAGGCCG AATCCGCCGC CGATCAGATC GAACTCGATA CCCTTAAAAA GCGCGAAGAG
GACTACCTGA GACAGATCGA ACAAGACAAA CGCGATTTGG AGAAAAGTCG ACGCGTCTCC
TAG
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| Protein sequence | MSGPAGIRKS RTGIAGFDEL TLGGLPTGRP TLVCGSAGCG KTLFAATFLV HGVKDFDEPG
VFVSFEERPV DIIDNVASLG FHLDDLIEEG RVVIEHIAVD PSEVAEIGDY DLEGLFLRLE
LAIDTIGAKR VVLDTIESLF SAFSNPAILR AEIRRLFDWL KEKGMTTVIT GERGEGSLTR
QGLEEYVSDC VLLLDHRVEN QISTRRLRIV KYRGTNHGTN EYPFLIDEDG FSVLPVSALG
LSHKIYDERI STGVADLDAM LSGGGFHRGS SILVSGVAGS GKSSLAASFV DATCRAGESV
IYFSFEESHE QATRNMKSIG IDLGQWMASG QLKYIATRPT FYSLEMHLAI VLREVIKLKP
SLVILDPISA FTESGERLEV QGMLLRIVDF LKSRGVTGVF THLMQSGDNL IKTDAGLSSL
MDAWILLLNR EVNGEFNREL YLLKARGMEH SNQVREFVMS RSGISLLPPY IGEGGALTGS
ARKIEEARQA RLETERRIEA ARLKREIEQR HRRNRAQIDL LQAESAADQI ELDTLKKREE
DYLRQIEQDK RDLEKSRRVS
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