Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2301 |
Symbol | |
ID | 3835729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 2662275 |
End bp | 2663840 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637826403 |
Product | ABC transporter component |
Protein accession | YP_427388 |
Protein GI | 83593636 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.238746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCCATCGG CAAGGCTCTC GCCCCGGCTT TCCTCCCCCG CCGGATGTCG TCAGACAGAG TGGTCCCAGA TGCCCGAAGC CTTTATCGAA CTGCGCGCCA TCACCAAGCG GTTTTCCGGG GTGTGCGCGC TTGACGCCTT GTCCTTGACC ATCAACAAGG GCGAGATTCA TTGTCTGGCC GGCGAGAACG GCTCGGGAAA ATCCACCGTC ATCAAGGTGA TGGCCGGGGT TTACCAGCCC GACGGCGGCG AGATCCTGAT CAACGGCGCG CCGGTGCGGG CGCTGACCCC GATCGAGGCG GTCCGCCGCA ATATCCAGGT CATCTACCAG GACTTTTCGC TGTTTGGCAA TCTGACGGTC GCCGAGAATC TGGCGCTGTG CGGCGAGCTT CAGCAAAAGC GCAAGCTGGC CGACTGGAAG CGCATCCGCG CCATCGGCCG TCAGGCCCTC GACCGGCTGG GCGTCGATAT CGACCTGGAG GTCGATGTCG AACGGCTACC GACCTCGAGC CGCCAGATCG TCGCCATCGC CCGCGCCCTG ATGTCGGACG CCAAGCTGCT GATCATGGAC GAACCGACGA CGGCCCTGAC TGGCCGCGAG GTCGACGCCC TGTTCCGCAT CGTCAAGGAT ATCCAGGCCC AGGGCATCGC CGTGCTGTTC GTCAGCCACA AGATGCGCGA GATGCTGGAA ATCAGCGAGC GGTTGACCGT CATCCGTAAT GGCCGCACCG TCATCGACGG CCCGACCAGC GCCTTTGATG AAAGCGCCGT CACCCGCCAT ATGACCGGCC TTGATATTCT CAGCGAGGGC TACGCCTGGG CCGGATCGCC CGAGGCTGTG CCCCGGCTGG AGGTGCGCGG CCTTAGTCTC CCCGGCGCTT TTGAAGACCT GTCCCTGGCC ATCCGCCCGG GCGAGATCGT CGGGCTGTCG GGGCTGCTTG GCTCGGGACG GACGGAATTC GCGCTCAGCC TGTTTGGCAT GATGCCGCCG GCCGCCGGGC AAGTCCTGGT CGATGGCGCC CAGATCGCCC CGCGCTCGGT GCAAGACGCC ATCGCCGAGG GTATCACCTA TGTGCCCGAG GATCGGCTGA CCGAAGGCCT GTTCCTGACC CAGTCGATCG ACCGCAATAT CCTGGCCACG TCTTATGAAC GCCTCGCCCC CAGGGGGGTG ATCGACCGCG CCAAGGCGGC GATGCAAAGT GCGGGCATGA TCAAGGCGAT GCAGATCGCC ACGCCGACGG GCGAGAAACC CGTGGGCCAA CTGTCGGGCG GCAATGCCCA ACGCGTCGTG TTGGCGCGCT GGCTGCTGAC CGATGCCAAG GTTCTGATCC TCAACGGGCC GACGGTCGGC GTCGATGTCG GCTCGAAGGC CGAGATCCAC CGCAAGATCC GCGAGCTGGC CAGCGCCCAT GGTCTGGCGG TGTTGATGAT CTCCGATGAC GTTTTGGAAC TGGTGCAAAA CACCAACCGC ATCGTCCTTA TGCACCGCGG TCGCTTCGTC GACGACCTGC CGACCGCCAC GGTCAGCGAG CAGTCGATCA ACGACTTGCT CAAAAGCTTC ACCTGA
|
Protein sequence | MPSARLSPRL SSPAGCRQTE WSQMPEAFIE LRAITKRFSG VCALDALSLT INKGEIHCLA GENGSGKSTV IKVMAGVYQP DGGEILINGA PVRALTPIEA VRRNIQVIYQ DFSLFGNLTV AENLALCGEL QQKRKLADWK RIRAIGRQAL DRLGVDIDLE VDVERLPTSS RQIVAIARAL MSDAKLLIMD EPTTALTGRE VDALFRIVKD IQAQGIAVLF VSHKMREMLE ISERLTVIRN GRTVIDGPTS AFDESAVTRH MTGLDILSEG YAWAGSPEAV PRLEVRGLSL PGAFEDLSLA IRPGEIVGLS GLLGSGRTEF ALSLFGMMPP AAGQVLVDGA QIAPRSVQDA IAEGITYVPE DRLTEGLFLT QSIDRNILAT SYERLAPRGV IDRAKAAMQS AGMIKAMQIA TPTGEKPVGQ LSGGNAQRVV LARWLLTDAK VLILNGPTVG VDVGSKAEIH RKIRELASAH GLAVLMISDD VLELVQNTNR IVLMHRGRFV DDLPTATVSE QSINDLLKSF T
|
| |