Gene Rru_A2223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2223 
Symbol 
ID3835651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp2582482 
End bp2583393 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content64% 
IMG OID637826325 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_427310 
Protein GI83593558 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCTCG TTCCGTTCGA TGACCGTGAC GGTTTCATCT GGTTCAACGG TCAAATGGTG 
CCCTGGCGCG AGGCCAAGGT TCATGTGCTG ACGCATGGCC TGCATTATGC GAGCTGCGTG 
TTTGAAGGCG AGCGCGTCTA TAACGGCAAG GTGTTCAAGC TGACCGAGCA TTCGCGCCGA 
CTGACCGAAT CGGCGTCGAT TCTGGGGTTT TCCCTGCCCT ATTCGGTGGC CGAAATCGAT 
GCGGCGACCC GCCGGGTGCT TGACGCCAAC GGCATCGTCG ACGGCTATGT CCGCCCGCTG 
GCCTGGCGTG GCAGCGAGAT GATGGGGGTG GCGGCCCAGA AGAACCGCAT CAATGTCGCC 
ATCGCCGCCT GGCAGTGGCC CAGCTATTTT TCGCCCGAAG CCCGGCTGGC CGGCATCCGC 
CTGAAGATCT CGCCGTGGCG GCGTCCGGCC CCCGACACGG CGCCGACCCA TTCCAAGGCC 
GCCGGTCTTT ATATGATCTG CACCCTGTCC AAGCATCAGG CCGAGAACGA TGGCTTCGAC 
GACGCCCTGA TGCTCGATTA CCGGGGCCGC ATCGCCGAGG CGACGGGAGC CAATGTCTTT 
CTGGTGATCG ACGGCAAGCT GCATACGCCC ATTCCCGACT GCTTCCTGAA CGGCATCACC 
CGCCAGACCG TGATCGATCT GGCCCGACGC CGCGGCTATG ACGTGAGCGA GCGGGCGATC 
ATGCCCGAGG AACTGGCCGA CGCCCAGGAA GTGTTCCTGA CCGGGACCGC GGCCGAGGTG 
ACGCCGGTCC GCCAGATCGG AGAATACACC TATACTCCGG GCGAAATCAC CCACCGGTTG 
GTCGAGGATT ACGATAAGGA AGTCGGGCGG ACCCACGACA AGGCGGCCTC CGCCTCCGCT 
TCGGCGGCCT GA
 
Protein sequence
MALVPFDDRD GFIWFNGQMV PWREAKVHVL THGLHYASCV FEGERVYNGK VFKLTEHSRR 
LTESASILGF SLPYSVAEID AATRRVLDAN GIVDGYVRPL AWRGSEMMGV AAQKNRINVA 
IAAWQWPSYF SPEARLAGIR LKISPWRRPA PDTAPTHSKA AGLYMICTLS KHQAENDGFD 
DALMLDYRGR IAEATGANVF LVIDGKLHTP IPDCFLNGIT RQTVIDLARR RGYDVSERAI 
MPEELADAQE VFLTGTAAEV TPVRQIGEYT YTPGEITHRL VEDYDKEVGR THDKAASASA 
SAA