Gene Rru_A2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2010 
Symbol 
ID3835435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2323548 
End bp2324714 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content70% 
IMG OID637826110 
Productaminotransferase, class V 
Protein accessionYP_427097 
Protein GI83593345 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCCCC CTTCGCCGCC GCTGATGCTG ACCACCGGCC CGGTCACCGC CTATCCCGAG 
GTTTCCGAGG CCCTGTCGCG ACCGATCCTT TATGATGGCG ACGACGCCTT TCGCGGCTAT
TACGCCCAGG TTCTGGCGAT GCTGGGCCGG GTGATGGGCT TGTCCACGCC GCCGGTGATT
TTGCAAGGCG AGGCGATCTT GGGCATCGAG GCCGCCGCCG CCGGACTGAT CGGCCCCAAG
GACGTGGTGC TCAATTTGGT CTCGGGCGTT TATGGCCAGG GCTTTGGCCG CTATGCCTTG
CGCGCCGGCG CCGAGGTGAT CGAACTGGCC GTGCCGTTTG ACGCGGCGAT CGATCCGGCG
GACGTCGCCC GGAGCTTACG CGCGCGCCCC GATATCGGCG TGGTCGCCGT CTGTCATCAT
GACACGCCCT CGGGCACGCT CAATCCGCTG GCCGACATCG GCGCGGTGGT CGCCGCCCAC
GGCGCCTTGT TGATCGTCGA TGCCGTGTCG TCCTTCGGTG GCATGGAGGT GTTTCCCGAG
GCGGTGGCGG CCGATCTGTT CATCACCTCG CCGGCGAAAT GCCTGGGCGG AACCCCGGGG
CTGAGTTTGC TGGGCGTGTC CGATCGCGCC TGGGCCAAAA TGCGGGCCAA TCCCCAGGCG
CCGCGCGGCT CGTTCCTCAG CCTGCTTGAT TGGCAAGACG TTATCGAGGA CGGCCGGACC
TTTCCGGTCA CGCCGTCGAT CGCCGAGATC TATGGCCTGG AAGCCGCCCT TGCGCGCCAT
CTGGCCGAGG GCGAGCGGGC GGTCTGGGCC CGCCACGCCC TGACGGCGCG GGCGACCCGG
GCGGGGATTC TGGCCCTGGG ATTGGCGCTG TGGCCGACCA GCGAGGCGCT CTGTTCGCCG
ACCACCACGG CGATCCGCAT CCCCGACGGC CTGTCGGACA AGGCCTTGCG CGATCATGCC
CGCGACCGGT CGGGCGTGTT GCTGTCGCTG GGGCGGGGGG CGACGGCGGG CAAGGTTCTG
CGCATCGGCC ATATGGGCCC GGCCGCCCAA CCCGATCACG CGCTGCGCGC CGTCGCCGCC
CTGGCAGCGG CAGCCAGCGC CCAGGGGCTC GCCGTCGATC GGCCGGCGGG CGAAAGCGCG
GTTCGCGCCG TGATCGACGG CATGTGA
 
Protein sequence
MAPPSPPLML TTGPVTAYPE VSEALSRPIL YDGDDAFRGY YAQVLAMLGR VMGLSTPPVI 
LQGEAILGIE AAAAGLIGPK DVVLNLVSGV YGQGFGRYAL RAGAEVIELA VPFDAAIDPA
DVARSLRARP DIGVVAVCHH DTPSGTLNPL ADIGAVVAAH GALLIVDAVS SFGGMEVFPE
AVAADLFITS PAKCLGGTPG LSLLGVSDRA WAKMRANPQA PRGSFLSLLD WQDVIEDGRT
FPVTPSIAEI YGLEAALARH LAEGERAVWA RHALTARATR AGILALGLAL WPTSEALCSP
TTTAIRIPDG LSDKALRDHA RDRSGVLLSL GRGATAGKVL RIGHMGPAAQ PDHALRAVAA
LAAAASAQGL AVDRPAGESA VRAVIDGM