Gene Rru_A1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1956 
Symbol 
ID3835380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp2264924 
End bp2265610 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content68% 
IMG OID637826055 
Producthaloacid dehalogenase-like hydrolase 
Protein accessionYP_427043 
Protein GI83593291 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.155964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGGGC TGGCGGCGAT GATCCTTGAT CGCGACGGGA CGACGCTCGA CTTCAGCGCC 
ATGTACCTCG CCTTCATGAA CGGCCTTTAT CAGCGCGCCG GCCTTGAGGC GCCAAGCGCG 
GCCGACCTGC TGCGCTATGA AACCTGGGAG CGGATCATCG CCGGCGAGCT GTGGATCGGC 
ACCCAGCGGG TCCTAGACAT CGTCGATGAC ATTCCGCGCC GCCACATGGA TCACGGCCTG 
CTTTTCCCCG GCGTCGCCCA GGGATTGCGC CGGGCCCGGG CCGATGGCCT GCGCCTTATC 
CTGGTCAGCG CCTGGGTGGG AAGCGCGGCC ACCCGCGCCT TGCTCGCCCG TGAAGGCGTG 
CTTGACGCCT TTTGCGCCGT CTGGACGGCC GATGACCTGG GCGATCTGCC CGCCAGCACC 
TCGCCGGTAC CGGTCAAGCA GATGCTCGTC GAGCGCGCCG TCGCCCACCT TGGCGTCGAT 
CCCGAACACT GCCTGATGGT CGGCGATTCC CCCGATGACA TCCTGGCCGG CGCCCGCCTG 
GGAATGCGAA CGGCGATGGT GCGCACCGGC AACGGCGCCC GTTTCGCCGA TATCATCCTT 
CCCGCCCCCG ACCTTGTCGC CGACAGCCTG ACCCAATTGC TCGCCCGGCT TTATCCGCCC 
TCCCCCCTCG CCTCCCACGC TCCGTAA
 
Protein sequence
MNGLAAMILD RDGTTLDFSA MYLAFMNGLY QRAGLEAPSA ADLLRYETWE RIIAGELWIG 
TQRVLDIVDD IPRRHMDHGL LFPGVAQGLR RARADGLRLI LVSAWVGSAA TRALLAREGV 
LDAFCAVWTA DDLGDLPAST SPVPVKQMLV ERAVAHLGVD PEHCLMVGDS PDDILAGARL 
GMRTAMVRTG NGARFADIIL PAPDLVADSL TQLLARLYPP SPLASHAP