Gene Rru_A1938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1938 
Symbol 
ID3835362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2246030 
End bp2246893 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content68% 
IMG OID637826037 
Producthypothetical protein 
Protein accessionYP_427025 
Protein GI83593273 
COG category[R] General function prediction only 
COG ID[COG2961] Protein involved in catabolism of external DNA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTACG ATCACGCGTA CCACGCCGGG AATTTTGCCG ACGTTCTGAA GCATACAGTC 
CTTGCGCTAT GTTTGAACCA CCTTACCCGC AAGCCCAAGC CCTTTTTCGT CCTCGACACC
CATGCCGGTC AGGGGCGATT CGATTTGGCC GGACCGGAGG CGGAGAAAAC CGGCGAGGCG
CGGGGCGGCA TCTTCCGCCT GCTCGAAGCC CCCGACCTGC CCGAAGCCCT TGCCCCCTAT
CTCGCCCAGG TGCGGCGGCT GGGCATGGTC GAGGGCACCC TGCGGCGCTA TCCCGGCAGC
CCCCTGCTCG CCCGGGCCCT GATGCGGCCC GGCGACAGGC TGGTGGCGGC CGAATTGCAC
CCGGTCCACG GCGAAAGCCT AGCCCGGCTG ATGCGCGGCG ACCGCGATAC CCGCATCGAG
GCCCGCGACG GCTATGAGGC GCTCAAGGCC CTGGTCCCGC CCCCCGAGCG CCGGGGGCTG
GTGCTGATCG ACCCGCCGTT CGAGCGCACC GACGAATTCA CCGCCCTGGA GCGCGCCGTC
ACCGCCCTGG TCGGGCGCTG GCGCGCCGGC ACCTGCGTAA TCTGGTACCC GATCAAGGAC
GAGCCCGCCG TCCGCCGCTT TCACCAGACC TTGAAGGACC GTCTTGATGT GCCGACCCTG
ATCGCCGAAT TATGGGTCAG GCCGCGCTTT CCACCGCTGA AACTGAACGG CACCGGGCTG
GTGATCCTTA ATCCGCCCTA TCCGCTGCAC ACCGCCCTGC CCGAGGTGCT GCCCTGGCTG
GCCGGGGTGC TGGCCGAGCC CGGCGGCGGC GACTGGCGTC TTGACTGGTT GATCGAGGAG
AGGATGGGAC CATGCCCCGG CTGA
 
Protein sequence
MNYDHAYHAG NFADVLKHTV LALCLNHLTR KPKPFFVLDT HAGQGRFDLA GPEAEKTGEA 
RGGIFRLLEA PDLPEALAPY LAQVRRLGMV EGTLRRYPGS PLLARALMRP GDRLVAAELH
PVHGESLARL MRGDRDTRIE ARDGYEALKA LVPPPERRGL VLIDPPFERT DEFTALERAV
TALVGRWRAG TCVIWYPIKD EPAVRRFHQT LKDRLDVPTL IAELWVRPRF PPLKLNGTGL
VILNPPYPLH TALPEVLPWL AGVLAEPGGG DWRLDWLIEE RMGPCPG