Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1938 |
Symbol | |
ID | 3835362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 2246030 |
End bp | 2246893 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637826037 |
Product | hypothetical protein |
Protein accession | YP_427025 |
Protein GI | 83593273 |
COG category | [R] General function prediction only |
COG ID | [COG2961] Protein involved in catabolism of external DNA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTACG ATCACGCGTA CCACGCCGGG AATTTTGCCG ACGTTCTGAA GCATACAGTC CTTGCGCTAT GTTTGAACCA CCTTACCCGC AAGCCCAAGC CCTTTTTCGT CCTCGACACC CATGCCGGTC AGGGGCGATT CGATTTGGCC GGACCGGAGG CGGAGAAAAC CGGCGAGGCG CGGGGCGGCA TCTTCCGCCT GCTCGAAGCC CCCGACCTGC CCGAAGCCCT TGCCCCCTAT CTCGCCCAGG TGCGGCGGCT GGGCATGGTC GAGGGCACCC TGCGGCGCTA TCCCGGCAGC CCCCTGCTCG CCCGGGCCCT GATGCGGCCC GGCGACAGGC TGGTGGCGGC CGAATTGCAC CCGGTCCACG GCGAAAGCCT AGCCCGGCTG ATGCGCGGCG ACCGCGATAC CCGCATCGAG GCCCGCGACG GCTATGAGGC GCTCAAGGCC CTGGTCCCGC CCCCCGAGCG CCGGGGGCTG GTGCTGATCG ACCCGCCGTT CGAGCGCACC GACGAATTCA CCGCCCTGGA GCGCGCCGTC ACCGCCCTGG TCGGGCGCTG GCGCGCCGGC ACCTGCGTAA TCTGGTACCC GATCAAGGAC GAGCCCGCCG TCCGCCGCTT TCACCAGACC TTGAAGGACC GTCTTGATGT GCCGACCCTG ATCGCCGAAT TATGGGTCAG GCCGCGCTTT CCACCGCTGA AACTGAACGG CACCGGGCTG GTGATCCTTA ATCCGCCCTA TCCGCTGCAC ACCGCCCTGC CCGAGGTGCT GCCCTGGCTG GCCGGGGTGC TGGCCGAGCC CGGCGGCGGC GACTGGCGTC TTGACTGGTT GATCGAGGAG AGGATGGGAC CATGCCCCGG CTGA
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Protein sequence | MNYDHAYHAG NFADVLKHTV LALCLNHLTR KPKPFFVLDT HAGQGRFDLA GPEAEKTGEA RGGIFRLLEA PDLPEALAPY LAQVRRLGMV EGTLRRYPGS PLLARALMRP GDRLVAAELH PVHGESLARL MRGDRDTRIE ARDGYEALKA LVPPPERRGL VLIDPPFERT DEFTALERAV TALVGRWRAG TCVIWYPIKD EPAVRRFHQT LKDRLDVPTL IAELWVRPRF PPLKLNGTGL VILNPPYPLH TALPEVLPWL AGVLAEPGGG DWRLDWLIEE RMGPCPG
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