| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1903 |
|---|
| Symbol | |
|---|
| ID | 3835327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 2205726 |
|---|
| End bp | 2206652 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637826002 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_426990 |
|---|
| Protein GI | 83593238 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0838624 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTCG AGACCCTGGG CGCCATTGGC GGCGCCATGA GCCGCGCCGC CACCCCCCTG
GCCCTGGCCG CCGTCGGCGA GCTGGTGACC GAGAAGGCCG GCGTGCTCAA TCTTGGTGTC
GAAGGCATGA TGCTGGCCGG CGCCGTCGCC GCTTTCGCCG TGACCGTCGC CACCGGCAAT
CCACTGCTCG GCATCCTGGC GGCGATGGCG GCGGGGATGC TGCTGGCGCT GCTGTTTGGC
GTGCTGACGC TCAGCCTGAT GGCCAATCAG GTGGCGACCG GTCTGGCTTT GACCATTTTC
GGCATCGGTC TGTCGGCCTT TGTCGGCCGC GACTTCGTCG GCACGCCGCT GACCGCCCTG
GCGCCGATCC ATCTGCCGGT TTTGTCCGAT ATCCCGCTGA TCGGCCCGCT GATCTTCGGC
CAGGACCCGC TGGTCTATGT CACCTTCGTC CTCGTCGGCG GCGTGTCGTG GTTCCTGATG
CGCTCGCGCG CCGGTTTGAT CGTGCGCGCC GTTGGCGAAA ACCACGACGC CGCCCATGCC
CTGGGCTATG ACGTCATCGC CATCCGTTAC CGGGCCGTGC TGTTTGGCGG GGCGATGGGC
GGCTTGGCCG GGGCCTATCT GTCGTTGGTC TATACGCCGA TGTGGGTCGA GAACATGACC
GCCGGTCGCG GCTGGATCGC CCTGGCCCTG GTGGTTTTCG CCACCTGGAA GCCCTGGCGG
GTGCTGGTCG GCGCCTATCT GTTTGGCGGC GTCACCATCG TTCAGTTGCA TATCCAGGGC
ATGGGTGGGG CGATCCCCAG CCAGCTGCTG TCGATGCTGC CCTATCTTGC CACCATCGGG
GTTCTGGTGC TGATTTCGCG CGACGCCTTG CGCATCCGCT TGAACGCGCC GGCCTGCATC
GGCAAGGTAT TCCATCCGGA AAGCTGA
|
|---|
| Protein sequence | MDVETLGAIG GAMSRAATPL ALAAVGELVT EKAGVLNLGV EGMMLAGAVA AFAVTVATGN
PLLGILAAMA AGMLLALLFG VLTLSLMANQ VATGLALTIF GIGLSAFVGR DFVGTPLTAL
APIHLPVLSD IPLIGPLIFG QDPLVYVTFV LVGGVSWFLM RSRAGLIVRA VGENHDAAHA
LGYDVIAIRY RAVLFGGAMG GLAGAYLSLV YTPMWVENMT AGRGWIALAL VVFATWKPWR
VLVGAYLFGG VTIVQLHIQG MGGAIPSQLL SMLPYLATIG VLVLISRDAL RIRLNAPACI
GKVFHPES
|
|---|
| |