Gene Rru_A1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1860 
Symbol 
ID3835284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp2158112 
End bp2158756 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content70% 
IMG OID637825959 
Producturacil-DNA glycosylase superfamily protein 
Protein accessionYP_426947 
Protein GI83593195 
COG category[L] Replication, recombination and repair 
COG ID[COG1573] Uracil-DNA glycosylase 
TIGRFAM ID[TIGR00758] uracil-DNA glycosylase, family 4 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0361601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCGT GTAATCCCCA GGCGCCGGGG GTCGATTGCC CCCGGTGCCC GCGACTGGTC 
GCCTATCGGC TGGCCCTGCG CCGCGATTTT CCCGACTGGG CGAATGCCCC GGTCCCCTCC 
TTCGGTCCGC TGGGCGCCCG CCTGCTGGTG GTCGGCTTGG CGCCCGGCGT GCGCGGCGCC 
AATCGCACCG GCCGGCCCTT CACCGGCGAT TACGCCGGCG ACCTGCTCTA TGCCACCTTG 
ATCGATCTTG GTTTGATGAC CGGGGTTTTC GACCGCCGGG CCGATGACGG CCTGACGCCG 
ATCGACGTGC GCATCACCAA CGCCGTGCGC TGCGTGCCGC CTGAAAACAA GCCGACCGGC 
CCAGAACAGG TCGCCTGCCG GCCGTTCCTG GCGGCGGAAA TCGCCGCGAT GCCGGCCCTA 
CGCGGCATCC TGGCTTTGGG CCGCGTCGCC CACGAGGCGA TCTTGCGCAC GCTCGGCCAA 
CCCCTGAAGG CCCACCCCTT CGCCCATGGC GCCCTGCACC CGATGCCGGG CGGCCTGCTG 
CTGGGCGAAA GCTATCACTG CTCGCGCTAC AACCAGAACA CCGGCCGCCT GACCAACCCG 
ATGTTCCGCG AGGCGGTCAC GCGCTTGGTC GAGGCGATTA GCTAG
 
Protein sequence
MTACNPQAPG VDCPRCPRLV AYRLALRRDF PDWANAPVPS FGPLGARLLV VGLAPGVRGA 
NRTGRPFTGD YAGDLLYATL IDLGLMTGVF DRRADDGLTP IDVRITNAVR CVPPENKPTG 
PEQVACRPFL AAEIAAMPAL RGILALGRVA HEAILRTLGQ PLKAHPFAHG ALHPMPGGLL 
LGESYHCSRY NQNTGRLTNP MFREAVTRLV EAIS