Gene Rru_A1852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1852 
Symbol 
ID3835276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp2150932 
End bp2151597 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content68% 
IMG OID637825951 
ProductRNAse III 
Protein accessionYP_426939 
Protein GI83593187 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGCG ACCTGAACGC TCTTCAGATC GCCCTGGATC ATCGGTTCAC CGACCCCGCC 
TTGTTGGCGC GCGCCCTGAC CCACCGTTCG CGCGAGGGCA GGCCGAGCTA CGAGCGCCTG 
GAGTTTCTGG GCGACCGGGT GTTGGGGCTG GTGGTCGCCG AGATGCTGTA CGCCCGCTTC 
CCGACCGAGG ACGAGGGCGC CTTGGCGCGC CGTCACGCCA GTCTGGTTCG CCAAGACACG 
GTGGCCCGTG TCGCCCAGAG CGTTGGCCTG GGCGAGTTGA TGGAGCTGTC GCGGGGCGAA 
GAGGAATTGG GCGGGCAGTT CAATCCCTCG CTGCTCTGCG ATGTCTGCGA AGCGGTGCTG 
GGCGCGCTCC ATCTCGATGG CGGCTACGCC AAGGCCCAGC GCTTCGTCGA AGCGCGCTGG 
GCGCCCTTGA TGGCCGAAGA CCTGACCCCG CCCAAGGACG CCAAGACGGC CTTGCAGGAA 
TGGGCCCAGG GACGGGGCCT GCCGCTGCCC ACCTATGCGG TGGAAGGGCG GGACGGTCCG 
CCCCACAAGC CGATGTTCAC GGTGAGCGTG ACGGTCAAGG ATAACGGCTC GGAAAGCGCC 
CTGGGGGCCT CCAAGCGGCT GGCCGAACAG GCCGCCGCCC AAAGGCTTCT TGATCGTCTG 
GCCTGA
 
Protein sequence
MARDLNALQI ALDHRFTDPA LLARALTHRS REGRPSYERL EFLGDRVLGL VVAEMLYARF 
PTEDEGALAR RHASLVRQDT VARVAQSVGL GELMELSRGE EELGGQFNPS LLCDVCEAVL 
GALHLDGGYA KAQRFVEARW APLMAEDLTP PKDAKTALQE WAQGRGLPLP TYAVEGRDGP 
PHKPMFTVSV TVKDNGSESA LGASKRLAEQ AAAQRLLDRL A