| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1817 |
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| Symbol | |
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| ID | 3835241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 2113845 |
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| End bp | 2116682 |
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| Gene Length | 2838 bp |
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| Protein Length | 945 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637825916 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_426904 |
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| Protein GI | 83593152 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.703136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGTC TTCATCCTAT CTATTCCGGT CAGTCCGACA GGCCTGCCAT TCTGTTCGTT
CACGGACTTG ATGGCCATTG GCTTGAAACC TGGCGCCATG ACGCCTGCTC CAAGGACGAC
TGCTGGCCCC ATTGGGTAGG GGAAGAGACC GGATGCGACA TCTGGAGCTT GGAGTACGAT
GCCGCGCTTT CTGGCTGGTT GGATCAGGCC ATGCCCCTCC CCGACCAAGG TTCACAGGTT
ATGGACCTTT TGGCGAGTGC TCCGGCCCTG AAAGGCAAAC CCCTTGTGTT CGTAACCCAC
AGTTTGGGGG GGATTTTGGT CAAAACGGCG CTAGTCTATG GGGCCGAAGA AGATAGAAGA
TTTCAGCATA TCGTTGATCA CGTCCTCGGC GTTGTTTTTA TTGCGACGCC TCATTCCGGG
GCCCAGCTCG CCACGCTGGC AAGAGTGATA AAATACCTTC TCAGAATAAA TCCGCCAGTT
GGCAACCTTG AGCACCACGA TCCACACCTG AGGACACTGA ACCGACGATA TCAGACTCTG
GTCAAGGAGC GAGGAATCGA GGGATACGTT TACGCCGAGA AACGGGGTGT GAAGATTGGC
CCCCGGGGTT TTGGTGGCTG GCTGCGGCGC ATTGAGCCGA CGGTGATGGT GGTCGATCCG
GGCAGTACAG ATCCCAGCCT TCCCGAAATC CAACCCATCA GTCTTGCGGA AGATCATATC
AGTATTTGTA AGCCGCCCGA CCGGCAACAG CAGATCCATT TGTCTTTGTG CCACGTCTTA
AAGGAAAAGA TCATCCCCCT CGCCGGCGAT CGTGGGATGG GGACGACAGG GGTGGGGTTG
AAGCTCCTGG AGTCCGGTAC CGCCCAGGAA AACCCAGCGG CTCACATGCC ACCAGGGCGG
CTTGTTGGTC CAGATGATAA CCGGCTATCC CCGCGCGAGG GCAAGGTGTA TGGCCGTAAA
ACCCAAGAAA ACGACGTTCT GGCCTTTCTG AAGGGGAGCG AGCCGGTCAA AGTCGTGGGC
GGGGTCGCAG GCGTAGGGAA AACCGAGGTT TGTAAGGCCG CCCTCAAAAC TTGGCTGCAC
ACCAGTCCCC GTCCCGTGGC CTATTACGTG CGTGTTCCCG ATCGCGCCCG CTCGGCGGAC
TTGGTGCTCC AGGTGGGGAA GGCTGTCGGG ATTGAAAATT GTGAAAGTCT CGCGCAACTT
CTTGGCGTGA TCCCTGTGGG ATTGTACTAC CTGGATAATC TGGAAAGCGT TGCCGACGAC
CAAGAAGGCC GGAATGCCCT GCGTGATTTG GCCCAAAAAC CGGGTGTTCG GATACTGGCT
TCATCACGGA CTCGTCTCGA TACTATTTTT GGAGCTCCTA TCGAGATCAA ATGTCTATCG
GCTCCCGATG CTTTGGCGCT GTTTCGGGAT TTGTGGCCCC CCACCCAGAC GCTTCCGAAG
GATGACGAGT TGCAAGCCTT CGTGATCGGT AAACTAGGGG GGCATGCCCT CAGCCTTGTT
CTGGTGGCTC GTTTGGGGAT GTGCCTTTCC TTTGATGCCC TGCGCCGCCG CTGGGACGAA
GAAGGGGCCG CGCTGGCCTG CGATGGGGTT GAGGATGATA CACGCACCAG CAACTTAACG
TTCAACCTAC GGCTGACGGC CGAGGTCCTG GCCCCCACAC CAGGCGCCTT GTCCGTCTGG
GTCCTAATGG CTTTATTCGA AGAAGGGATT CCTGAAGCGG TATTGGAAGA GGTGGAGCGG
CGCGGACAAT GGCCCACCTT GGCGCGACAC CGCCTTGCTG TGCACCACTT GATTTCCAAA
AGGGGAGACC GGTGGTTTCT TCCCCCTCCC GTGGCTCGCT ATGCTCGATA TGCCGCGGTT
ACCGAACAAG ATGGCTTTTG CTGGCGGAAA AGCCGACAGC CGATCCTGGA CTTGTTTTTG
GTTTTTGCCG AAAAAGCCTC TTCTTTTGAC TCAAGTCCAG AAACATTAAA AGCAAAGAAA
TGGATTCTAG AATTTTTCAA TACAATTTCT ATTGTAATTG AGTGTGAATT AGAATCCAAT
GTTCAGAACA AATTTTGGCT TAACCGTATG AGTTATTTTC TTCGCGATAT TTACCAGCAG
CGGATCGCTG TGAGCCCCGC CTTGCTGAGA AAACTGGCCG ATGCAGGAAT CCAGCCGGCC
AACACGCTCC GGAGTCTCGG CGATCTGGCA AGCCGGTTGG GGCAGGTGGA CAAGGCGCGA
TCTTTGTATG AAAAGGCGCT CGGGCTTTCC CAACAGGAGC AATCAGGTCT TGGTCAGGCC
AACGCGCTAA AGGCCCTCGG CGATCTGGCA AGCCGGTTGG GGCAGGTGGA CAAGGCGCGA
TCCTTGTATG AAACGGCGCT CGGGCTTTTC CAACAGGAGC AACATGGTCT TGGTCAGGCC
AACACGCTTC ACGGCCTCGG TGATCTGGCA AGCCAGTTGG GGCAGGTGGA CAAAGCGCGA
TCCTTGTATG AAAAGGCGCT CGGGCTTTTC CAGCAGGAGC CAAATGGTCT TGGTCAGGCC
AACACGCTGA AGAGCCTCGG CGCTCTGGAA TATCGGTTGG GGCAGGTGGA CAAGGCGCGA
TCTTTGTATG AAAAGGCGGT CGATCTCTAT CGAATTGAAC AAGAGCCACT AGGGCTTGCC
TATTCTCTTA CGAATCTTGC TCTATGCTTT GAGGTTCTGA AAAACCTTTC CAAGCGCAAC
CAAGTATTAA AAGCTGCCTT TGTAGCTAGT CGTGATGCCA ACAATGAGAT AGTTCAAATC
TATCTGAAGG AGGCCATCCC GGAAATGCCC GGGGCAGATG TTCTATATGA TTCGTGGTTA
AAGGGGCAGT CTCGGTAA
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| Protein sequence | MARLHPIYSG QSDRPAILFV HGLDGHWLET WRHDACSKDD CWPHWVGEET GCDIWSLEYD
AALSGWLDQA MPLPDQGSQV MDLLASAPAL KGKPLVFVTH SLGGILVKTA LVYGAEEDRR
FQHIVDHVLG VVFIATPHSG AQLATLARVI KYLLRINPPV GNLEHHDPHL RTLNRRYQTL
VKERGIEGYV YAEKRGVKIG PRGFGGWLRR IEPTVMVVDP GSTDPSLPEI QPISLAEDHI
SICKPPDRQQ QIHLSLCHVL KEKIIPLAGD RGMGTTGVGL KLLESGTAQE NPAAHMPPGR
LVGPDDNRLS PREGKVYGRK TQENDVLAFL KGSEPVKVVG GVAGVGKTEV CKAALKTWLH
TSPRPVAYYV RVPDRARSAD LVLQVGKAVG IENCESLAQL LGVIPVGLYY LDNLESVADD
QEGRNALRDL AQKPGVRILA SSRTRLDTIF GAPIEIKCLS APDALALFRD LWPPTQTLPK
DDELQAFVIG KLGGHALSLV LVARLGMCLS FDALRRRWDE EGAALACDGV EDDTRTSNLT
FNLRLTAEVL APTPGALSVW VLMALFEEGI PEAVLEEVER RGQWPTLARH RLAVHHLISK
RGDRWFLPPP VARYARYAAV TEQDGFCWRK SRQPILDLFL VFAEKASSFD SSPETLKAKK
WILEFFNTIS IVIECELESN VQNKFWLNRM SYFLRDIYQQ RIAVSPALLR KLADAGIQPA
NTLRSLGDLA SRLGQVDKAR SLYEKALGLS QQEQSGLGQA NALKALGDLA SRLGQVDKAR
SLYETALGLF QQEQHGLGQA NTLHGLGDLA SQLGQVDKAR SLYEKALGLF QQEPNGLGQA
NTLKSLGALE YRLGQVDKAR SLYEKAVDLY RIEQEPLGLA YSLTNLALCF EVLKNLSKRN
QVLKAAFVAS RDANNEIVQI YLKEAIPEMP GADVLYDSWL KGQSR
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