| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1714 |
|---|
| Symbol | |
|---|
| ID | 3835135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 2006777 |
|---|
| End bp | 2007697 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637825810 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_426801 |
|---|
| Protein GI | 83593049 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAT CAGAGGTCAC GCTTGAACGC CTGCGCAGCT TCGTGCGCGT CGCCGAACGG
GGCAATCTGT CGGCGGTCGC CCGCGAATTG GGGCTTGGGC AATCGACCAT CACCCGCCAC
TTGCGCGAGT TGGAAGAGGC CGTCGGCGTG GCGTTGCTCA GCCGCACCAC GCGCAGGGTC
GTCCTGACCG ACGAGGGAAG CCGTTATTAT GCCGACAGCC TGCAGATCCT GCGCCTAGTC
GATCAGGCGG GCGAAGAAGC CCGCGCGGCG CGGGGCGCCC CGGCGGGAAC GATCCGCCTG
TCCTGCACGG CGGCCTTGGG TGTTCTTCAT ATCAGCGGGC TGATCTTCGC CTTTCAGGAT
CGCTACCCGG ATATCCGCGT CGATCTTGGC CTGACCGACG AGCGCATCGA TCTTGTGCGC
GAGGGCGTCG ATATCGCCCT GCGCCTTGGG CCGCTGACCG ACAGCGGGCT GAAGCTTCGC
CCCCTTGGTC TCAGCCGCCG CGTGCTTGTC GCCGCGCCCG CCTATCTGGC GGCGCGCGGC
CGACCGGCCG CCCCCGGGGA CCTCGCCGGC CATGACGCCA TCACCATGGC GAATGTGGCG
GGAAGCGATG TTCTAGAGCT GCGTGGGCCC GATGGTCAGC GCCACCGCGT GCCGGTTGGC
GGGCGGTTGC GCGTCGATCA GGGGCTTGCG GCCCGCGAGG CCTTTCGCGC CGGTCGCGGC
TTTGGCCCCA CCCACCGCTG GCTGGTGGAC GATCTGGTGG CGGCGGGCGG GCTCGAAGTT
ATCTTGCCCG GTTACACGCC GCCCGCCGTG CCCTTGAACA TGCTGATCGT TCCCGAGCGG
GCGGCGATCG CCCGCGTTCG CTTGCTGGTT GATTTCCTGG TCGAAAGGAT CGGCCAGATC
CCTGGACTGG AGACAAGCTA A
|
|---|
| Protein sequence | MDKSEVTLER LRSFVRVAER GNLSAVAREL GLGQSTITRH LRELEEAVGV ALLSRTTRRV
VLTDEGSRYY ADSLQILRLV DQAGEEARAA RGAPAGTIRL SCTAALGVLH ISGLIFAFQD
RYPDIRVDLG LTDERIDLVR EGVDIALRLG PLTDSGLKLR PLGLSRRVLV AAPAYLAARG
RPAAPGDLAG HDAITMANVA GSDVLELRGP DGQRHRVPVG GRLRVDQGLA AREAFRAGRG
FGPTHRWLVD DLVAAGGLEV ILPGYTPPAV PLNMLIVPER AAIARVRLLV DFLVERIGQI
PGLETS
|
|---|
| |