| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1698 |
|---|
| Symbol | |
|---|
| ID | 3835118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 1988154 |
|---|
| End bp | 1989167 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637825793 |
|---|
| Product | cation efflux protein |
|---|
| Protein accession | YP_426785 |
|---|
| Protein GI | 83593033 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1230] Co/Zn/Cd efflux system component |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0335559 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATACCC ATGATCTTTC TCCCTGGACC CATGATCACG TCTATGCCAC CGGCGGCGAG
GCGGCGGCGG AACGGCGAAC GCGGCTCGTC GTCGCCCTCA CCGTGGCGAT GATGGGGCTG
GAAATCGTTG TCGGCACCCT GACCAATTCG ATGGCGCTGC TGGCCGATGG TTTTCACATG
GCCACCCATG CGGCGGCCCT TGGCATCGCC GCCTTCGCCT ATGCCCATGC CCGCCGCCAC
GCCTTTGATC GCCGCTACAG CTTTGGCACC GGCAAGGTCG GCGCCTTGGC GGCTTTCACC
AGCGCCATCA TCCTCGGCGT TGTCGCCCTG GGGATGGTCT GGGAATCGGC CAGCCGCTTT
TTCAGCGTGC AGACCATCGC CTTTGAACAG GCCCTGATCG TCGCCACGCT CGGCCTTGTC
GTCAATCTGC TGTCGGTGCT GATCCTCGGC GGCCCCGGTC AGGCCCCTCA CCATGACCAT
GGGCACGATC ATGGGCATGG GCATGGGCAC GACCACGGGC ACGGCGCCCA TGAGGATCAC
AACATCCGCG CCGCCTATCT GCATGTGATG GCCGATGCCG TCACCTCGGT TCTGGCGATC
GTCGCCTTGC TCTTTGGCAA ATATATGGGC TGGTGGTGGC TTGATCCGCT GATCGGCATC
GTCGGTGCCG CGGTCATCGG GCGTTGGGCC TGGGGGCTGA TGATGCGCTC GGGCGCGGTG
CTGCTGGATC ATAGCGCCGA CAAGGGCTTG GAAGACGAAG TGCGCATGGC GATCGAGGGC
GACGGCACGG CGATCAACCG GGTGGCCGAT CTTCATCTGT GGCAGGTCGG CCCCGGCCAT
TGGGCGGCGA TCGTCTCGGT GGTCAGCGAT ATCGTCCAGC CGATCGCCCA CTACCGCGCC
CTGTTGGCCG AGGTCCATGA ACTCAGCCAT GTGACCATCG AGGTCCAGGC CTGCGCCGGA
TGCGAGGGCG ATTGCGGCTG CGCCTGCGGC GCTGCGACCG CTTCCGCCGT ATAA
|
|---|
| Protein sequence | MHTHDLSPWT HDHVYATGGE AAAERRTRLV VALTVAMMGL EIVVGTLTNS MALLADGFHM
ATHAAALGIA AFAYAHARRH AFDRRYSFGT GKVGALAAFT SAIILGVVAL GMVWESASRF
FSVQTIAFEQ ALIVATLGLV VNLLSVLILG GPGQAPHHDH GHDHGHGHGH DHGHGAHEDH
NIRAAYLHVM ADAVTSVLAI VALLFGKYMG WWWLDPLIGI VGAAVIGRWA WGLMMRSGAV
LLDHSADKGL EDEVRMAIEG DGTAINRVAD LHLWQVGPGH WAAIVSVVSD IVQPIAHYRA
LLAEVHELSH VTIEVQACAG CEGDCGCACG AATASAV
|
|---|
| |