| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1682 |
|---|
| Symbol | |
|---|
| ID | 3835102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 1974564 |
|---|
| End bp | 1975439 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637825777 |
|---|
| Product | D-amino acid aminotransferase |
|---|
| Protein accession | YP_426769 |
|---|
| Protein GI | 83593017 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
|---|
| TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGCA TCGCCTATGT CAACGGTCAG TATGTGCTTC ATCGCGACGC CGCGGTCCAT
ATCGAGGATC GCGGCTACCA GTTTTCCGAC GGTATCTACG AGGTGACGGC CATCTATAAG
GGCCGGCCCG TGGATAACGA CGGCCATTGG GACCGCCTGG AGCGCTCGCT GCGCGAACTG
AGGATCGACA TGCCGATGAC CCGGGGCGGC CTTGATCTGG TCGCGCGCGA GGTGGTTCGC
CGCAACCGCG TGCGCAACGG CATCATCTAT ATCCAGATCA CCCGGGGCGT CTCGCCGCGC
AACCATCCCT TTCCCAAGGA CACCCCGCCG TCGATCGTCA TGACGGCGCG CCACGGCCTG
GGCTCGAAGC CCGAAGTCGC CGCCAAGGGC GTCAGCCTGA TCAGCCATCC CGATATCCGC
TGGGGCCGGC GCGACATCAA GACCGTTTCG CTGCTGCCCA ACGTGCTGGC CAAGCAGGCC
GCCTATGAGC AGCACGCCTA TGAGGCGATC CTGGTCGGAC CCGATGGCAT GGTCAGCGAA
TGCTCGTCGT CCAACGCCTG GATCGTCACC AAGGATGGCG CCCTGGTCAC CCGGCCGCTG
TCCAACGACA TTCTCGGCGG CATCACCCGC AAGCGGCTGA TCGATCTGGC CGACGCCGAG
GGGCTGCGGG TCGAGGAGCG GTCGTTCTCC CTCGACGAGG CCAAGGCCGC CCGCGAGGTC
TTCGTTTCCT CGACCAGTTC CTTCGCCATG CCGGTGGTCC GCATCGACGA CAGCGTCATC
GGCAATGGCC ACCCCGGCAG CATCGTGACC AATCTGCGCG CCCGCTATTT CGACTTCCTC
GAGTCGGCAA GCGGTCCGCT GTGGTATGGC CACTGA
|
|---|
| Protein sequence | MSRIAYVNGQ YVLHRDAAVH IEDRGYQFSD GIYEVTAIYK GRPVDNDGHW DRLERSLREL
RIDMPMTRGG LDLVAREVVR RNRVRNGIIY IQITRGVSPR NHPFPKDTPP SIVMTARHGL
GSKPEVAAKG VSLISHPDIR WGRRDIKTVS LLPNVLAKQA AYEQHAYEAI LVGPDGMVSE
CSSSNAWIVT KDGALVTRPL SNDILGGITR KRLIDLADAE GLRVEERSFS LDEAKAAREV
FVSSTSSFAM PVVRIDDSVI GNGHPGSIVT NLRARYFDFL ESASGPLWYG H
|
|---|
| |