| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1436 |
|---|
| Symbol | |
|---|
| ID | 3834851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 1697495 |
|---|
| End bp | 1699348 |
|---|
| Gene Length | 1854 bp |
|---|
| Protein Length | 617 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637825526 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_426524 |
|---|
| Protein GI | 83592772 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACAACGC AGGCGCTATC GCCGGGCCGG GCCAGCCGGT GGCCCAGGCT TGGCTGGCGG
CATTGGGCCG CCCTTGCCCT GGCGCTTTTG GTGCTGTTTG GCCTTGACCG CCTGTCCCAG
GCCGGGGCGC AAAGCTGGAC CCTGTCCCAT GCCCGCGATG CCGCCAGGGC GGCCTGGACC
TCGCGCGCCG CCGTCTTGCA AAGCGAGATC GAGAAGCAGC GCTCGCTGCC CCTGGTGCTG
GCCAGCGATC CCGATCTTGG CCGCGCCCTG GAAAGCCGCG ATCCGGCCCA TATCGCCGCC
CTGAACGAGA AATTCGAAAC CCTGGCGGCG GGCACCCGGG CCGGGGTCAT CTATCTGCTT
GATCTGGGCG GGGTCGCCAT CGCCGCCAGC AACTGGCGGG CGGCCGACAG CTTCGTCGGT
TCGGATTACG GCTTTCGCCC CTATTTCCGC TTGGCGCTTG ACGAAAGGGC GACCGAGCAT
TTCGCCCTGG GCACGGTCAG CCATCGCCCG GGGCTTTACA TCGCCCGACG CATCGACGGC
GCCCGGGGCC CCTTGGGCGT TCTGGTGGTG AAGGTCGAGT TCGAGACCAT CGAGGCGCAG
TGGCAGGGCT TTGCCGAACC AACCTTCGTC ACCGACGCCC AGGGCGTGGT CATCATCACC
AGCCTGCCCT CCTGGCGCTT TCTGGCCGAG ATCCCGAAAT CGGCCGAAGA AAGCGCCCGC
ATCCGCGCCT CCCTGCCCTT CGAGAAAGCC CCGTTGACGC CGCTGCCGAT CCGGCGGGCC
GACGCCGTCG GCACCGTCGT CGTCGCCCTG CCGACCTCCC GGGCCGACCG CGCCAATGAA
AGGCCCTTCG TGCTTGAAGC CGGACCCCAG CCGGCGACGG CCTGGACGCT GCATGTCCTG
GCCCCGGCCC GGGTTCCCGC CGCCGTGGCC GCCGCCGCCC GCACCTTCGC CTTGATGCTG
AGCACCGGGG TGATCTGCGG GTCGGGCCTG TGGTATGCGC GCTCGCTGCG ACGGGCGCGC
GAAAGGGGCC GCCAGCGCGC CGCCCGCATC GAACTGGAAG AGCGCGTTAG CGAACGCACC
GCCGAGCTGC GCAGCGCCAA TGACCGCCTG CTGACCGAGA TCGACGAGCG CCGCCGGGCC
GAGGCCGCCT TGCAAGACTT GCAAGACGAA CTGGTTCAGG CCCGCAAACT GGCCGTTCTT
GGCCAGATCG CCGCCAGCGT CGCCCATGAG ATCAACCAGC CGGTGGCCGC CATCCGCACC
TTCGCCGACA ATGCCCGCAT CTTCCTGGCC CGCGCCCAGC CCGAGGGCGC CGATCACAAC
TTGCAAACCA TCGCCACCCT GACCGAACGC ATCGGCGCCA TCACCGGCGA ATTGCGCGCT
TTCGCCCGCA AAAGCCCCAG CCGGGTCGAA CCGGTGTCGC TGCGCTCGGC CATCGATGGC
GCCCTGTTGC TGGTTGGCCA TCGCCTGCGT CAACAGGCCG TCACCCTGGG CGTTGACATC
GCCGAGGGCG ATCTGACGGT GGCGGCCGAA CGGGTTCGCC TTGAACAGGT GCTGGTCAAT
CTTTTGCAAA ACGCCGTCGA AGCCCTGGCC GGCCGGCGCG ACGGGACGAT CCGCATCGCC
GCCATCGCCG ATCGGGCGCG GGTGACCGTT ACCGTGTGCG ATAACGGACC GGGATTATCC
CCCGATGTCG TCGGATCGCT GTTCATGCCC TTCACCACCA CCAAGCCGAC CGGTCTTGGC
CTCGGGCTGG TGATCGCCAA GGACATCATC GCCGAGTTCG GCGGCAGCTT CACCGGCGAG
AACGCGGCAA GCGGCGGGGC GCGGTTCACC ATTACCCTGG CGAGGCCCCA ATGA
|
|---|
| Protein sequence | MTTQALSPGR ASRWPRLGWR HWAALALALL VLFGLDRLSQ AGAQSWTLSH ARDAARAAWT
SRAAVLQSEI EKQRSLPLVL ASDPDLGRAL ESRDPAHIAA LNEKFETLAA GTRAGVIYLL
DLGGVAIAAS NWRAADSFVG SDYGFRPYFR LALDERATEH FALGTVSHRP GLYIARRIDG
ARGPLGVLVV KVEFETIEAQ WQGFAEPTFV TDAQGVVIIT SLPSWRFLAE IPKSAEESAR
IRASLPFEKA PLTPLPIRRA DAVGTVVVAL PTSRADRANE RPFVLEAGPQ PATAWTLHVL
APARVPAAVA AAARTFALML STGVICGSGL WYARSLRRAR ERGRQRAARI ELEERVSERT
AELRSANDRL LTEIDERRRA EAALQDLQDE LVQARKLAVL GQIAASVAHE INQPVAAIRT
FADNARIFLA RAQPEGADHN LQTIATLTER IGAITGELRA FARKSPSRVE PVSLRSAIDG
ALLLVGHRLR QQAVTLGVDI AEGDLTVAAE RVRLEQVLVN LLQNAVEALA GRRDGTIRIA
AIADRARVTV TVCDNGPGLS PDVVGSLFMP FTTTKPTGLG LGLVIAKDII AEFGGSFTGE
NAASGGARFT ITLARPQ
|
|---|
| |