Gene Rru_A1291 details

Gene Information

• Locus tag: Rru_A1291
• ID: 3833599
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: +
• Start bp: 1524398
• End bp: 1525063
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637825381
• Product: ABC transporter component
• Protein accession: YP_426379
• Protein GI: 83592627
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGCTGC TGACCATCCG TGATCTTGAC GTGCGCTTTC CCGGCCTGGG CCGACCGGCG 
CTTTTCCTGC CCGCCCTGAC CCTGGAGGCC GGGCAGGCCC TGGTCGTCAC CGGCCCCTCG 
GGATCGGGCA AGACCACCTT TCTCAATCGC ATCACCGGGC TGGAAGCGTC CGCCGCCGGC 
GCCATCACCT GGCAGGGCAC CGATCTGGGC GCCCTGTCGG AAGGGGCGCG CGACCGCTGG 
CGGGCCCGCA CCATCGGGCT GGTGATGCAG GAGTTTCACC TGTTCCCCGG GCTCTCGGCG 
CTTGAAAACG TCGTCCTGCC CCAGCGGCTT GCCCATTTTC GCCTGCCACC CGCCGTTCTG 
GCCGAGGCCG AAGGCCTGCT TGCCCGGGTG GGGATCGAGC GGCCGGATCA ACGAATCGAG 
ACCCTGTCGC GCGGCCAGAT GCAGCGGGTG GCGGTCGCCC GCGCCCTAGT CGGACGGCCC 
GGCGTCATCG TCGCCGACGA ACCGACGGCC AGTCTTGATG ACGAGGCCGG GACGGCGGTG 
GCCGATCTGC TGGTCAATCT GGCCAAGGAT GCCGGGGCCA GTTTGATCGT CGCCAGCCAC 
GACCCGGTGT TCTTCGCCCG CATTCCCCGT TTGCTCCGGC TTGAAGCCGG GCGTCAGAGG 
GCCTGA 

 

Protein sequence

MPLLTIRDLD VRFPGLGRPA LFLPALTLEA GQALVVTGPS GSGKTTFLNR ITGLEASAAG 
AITWQGTDLG ALSEGARDRW RARTIGLVMQ EFHLFPGLSA LENVVLPQRL AHFRLPPAVL 
AEAEGLLARV GIERPDQRIE TLSRGQMQRV AVARALVGRP GVIVADEPTA SLDDEAGTAV 
ADLLVNLAKD AGASLIVASH DPVFFARIPR LLRLEAGRQR A