| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1287 |
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| Symbol | |
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| ID | 3833595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 1518208 |
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| End bp | 1520679 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637825377 |
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| Product | trimethylamine-N-oxide reductase (cytochrome c) |
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| Protein accession | YP_426375 |
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| Protein GI | 83592623 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAAGA TGTCTCCCCC GACCGCCTTC GCCGCACAAA CCCGGCGCAC CTTCCTGAAA
GCGAGCGCCG CCGCCGGTGC CCTTGGATTG GTCGCCCCCT CGCTGTTGTC TGCGGGCGTG
GCGCGGGCGG CCGAGGATGG CGAGGTCCTG ACCGGGTCGC ATTGGGGCGC CTTCCGCGCC
ACCGTGAAGG GCGGCAAGAT GACCGCCATC AAGCCCTGGG AAAAGGATCC CCATCCCAGC
CATCAGCTGA CCGGCGTGAT GGATTCGATC TATTCGCCCA CCCGCATCAA ATACCCGATG
GTCCGCCGCG CCTTCCTTGA AAAGGGTCCG GGCGCCTCGC CGGAAACCCG CGGCGCCGGC
GATTTCGTGC GCGTGACCTG GGATCAGGCG CTTGATCTGG TGGCCAAGGA ACTGACCCGG
GTGCGCAAGG ACCATGGGCC GACCTCGATC TTCGCCGGAT CCTATGGCTG GATGAGCCCG
GGCAAGCTGC ATAACTGCCG CAGTCTGGTG CGCCGCCTTC TCAATCAGAC CGGCGGCTTC
GTCAGCAGCT CGGGCGATTA TTCGACTGGC GCGTCCCAGG TGATCATGCC CCATGTCATG
GGCACGCTTG AGGTCTATGA GCAGCCGACC GTTTGGCCGG TGGTGGTCGA GCATTCCGAT
CTGGTCGTCT TCTGGGGCGC CGATCCGATG ACCACCAACC AGATCGGTTG GCTGATCCCC
GATCACGGCG CCTATGTCGG CCTCAAGGCC CTCAAGGAGT CCGGCAAGAA GGTGATCTGC
ATCGATCCGG TGCGCACCGA AACCTGCGAC TATCTGGGCG CCGAATGGAT CGCCCCCAAG
CCGCAGACCG ATATGGCGAT GATGCTGGGC GTCGCCCACA CGCTTTATAC CGAGAAGCTC
CACGATCAGA GCTTCCTTGA TGATTACACC TTCGGCTTCG ATCGCTTCTT GCCCTATCTG
ACTGGCGAAA GCGACAAGAC GCCCAAGAGC GCCGAATGGG CTTCGGCGAT CTGCGGCATT
CCGGCCGAGG TGATCAAGGA TCTCGCCCGC CGTATCGTCA AGGGCCGCAC CATGCTGGCC
TCGGGCTGGT CGATGCAGCG CCAGCACCAT GGCGAGCAGA TTCACTGGAT GTTGGTGACT
CTCGCCTCGA TGGTCGGTCA GATCGGCCTG CCGGGCGGCG GCTTTGGCCT TAGCTACCAT
TACGCCAACG GCGGCTCGCC CAGCGCCACC GGTCCCGTGC TGCCCGCCAT CAGCGACGGC
AGCGCCGCGG TGAAGGGGGC GGCTTGGCTG GCCGCCGGCG GTGCGGCCAG CATTCCCGTC
GCCCGCGTCG TCGACATGCT GATGAATCCG GGCAAGGAGT TCGATTTCAA CGGCACCAAG
GCGATTTATC CCGATACCAA GCTGATCTAC TGGACCGGCG GCAATCCCTT CGCCCACCAC
CAGAACCGTA ACCGCATGGT CGAGGCCTTC CGCAAGGTCG AGACCTTCAT CGTCCATGAC
TTCCAGTGGA CGGCGACGGC CCGCCACGCC GATATCGTGC TGCCCGCCAC CACCAGCTAC
GAGCGCAATG ATATCGAGCA GATCGGCGAT TATGCGCTCA GCTCGGTTCT GGCGATGAAG
AAGGTGGTCG AGCCGGTGTT CGAGGCCCGC TCCGATTTCG ATATCCTGGC CGCGGTGGCC
GAGCGCCTGG GCACGCGCGA CGCCTTCACC GAAGGCAAGG ACGAAATGGG CTGGATCAAG
GAGTTCTATG ACAACGCCCT GGGTCAGGCC AAGGCCAAGG GTGTGACGAT GCCCGACTTC
GAGACCTTCT GGAAGGGCGA GGGCGTGGTC AGCTTCCCGA TCTCCGATGA AGCCAAGGCC
TTCGTCCGTT ACAGCGCCTT CCGCGAGGAC CCGCTGCTCG AGCCGCTGGG CACTCCGACC
GGCAAGATCG AGATCTATTC CAAGAACATC GAAAAGATGG GCTATGACGA TTGCCCGGCC
CATCCGACCT GGATGGAACC GGTCGAGCGC CTGGACGGCC CGGGGGCGAA GTTCCCGCTG
CATATCACGA CCAGCCACCC GAAAAGCCGT CTGCATTCCC AGCTCTGCGG TACCAAGCTG
CGCGACAGCT ACACGGTGGC CGGGCGCGAA CCCTGCCTGA TCAACGAGGC CGATGCCAAG
GCGCGCGGCA TCAGCAATGG CGATGTGGTG CGGGTGTTCA ATGATCGCGG CCAGATCCTG
GCCGGGGCCG TCGTCACCAA TGCCATCCGC CCGGGCGTGA TCCGGGTCAA CGAGGGCGGT
TGGTACGACC CGACCGAGCC GACCAAGCCG GGCAGCCTGT GCAAATACGG CGACGTCAAC
GTGCTGACCG TTGATATCGG CACCTCCAAA CTGGCCCAGG GCAACTGCGG CCATACCGCG
ATCGGCGATG TCGAGAAATA CGCCGAGGCC GCGCCCGCCG TCACCGTCTT CGCCGCGCCG
AAGAACGCCT GA
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| Protein sequence | MSKMSPPTAF AAQTRRTFLK ASAAAGALGL VAPSLLSAGV ARAAEDGEVL TGSHWGAFRA
TVKGGKMTAI KPWEKDPHPS HQLTGVMDSI YSPTRIKYPM VRRAFLEKGP GASPETRGAG
DFVRVTWDQA LDLVAKELTR VRKDHGPTSI FAGSYGWMSP GKLHNCRSLV RRLLNQTGGF
VSSSGDYSTG ASQVIMPHVM GTLEVYEQPT VWPVVVEHSD LVVFWGADPM TTNQIGWLIP
DHGAYVGLKA LKESGKKVIC IDPVRTETCD YLGAEWIAPK PQTDMAMMLG VAHTLYTEKL
HDQSFLDDYT FGFDRFLPYL TGESDKTPKS AEWASAICGI PAEVIKDLAR RIVKGRTMLA
SGWSMQRQHH GEQIHWMLVT LASMVGQIGL PGGGFGLSYH YANGGSPSAT GPVLPAISDG
SAAVKGAAWL AAGGAASIPV ARVVDMLMNP GKEFDFNGTK AIYPDTKLIY WTGGNPFAHH
QNRNRMVEAF RKVETFIVHD FQWTATARHA DIVLPATTSY ERNDIEQIGD YALSSVLAMK
KVVEPVFEAR SDFDILAAVA ERLGTRDAFT EGKDEMGWIK EFYDNALGQA KAKGVTMPDF
ETFWKGEGVV SFPISDEAKA FVRYSAFRED PLLEPLGTPT GKIEIYSKNI EKMGYDDCPA
HPTWMEPVER LDGPGAKFPL HITTSHPKSR LHSQLCGTKL RDSYTVAGRE PCLINEADAK
ARGISNGDVV RVFNDRGQIL AGAVVTNAIR PGVIRVNEGG WYDPTEPTKP GSLCKYGDVN
VLTVDIGTSK LAQGNCGHTA IGDVEKYAEA APAVTVFAAP KNA
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