Gene Rru_A1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1250 
Symbol 
ID3833749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1470766 
End bp1471782 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content66% 
IMG OID637825340 
ProductBeta-lactamase 
Protein accessionYP_426338 
Protein GI83592586 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGAT CCCTGATCCT TCTCTGCGCG GTTTTTTGGC TGATCGCCGC GCCGGCCGAC 
GCCCGGACCA TGCCCGAGCT GGAGCGGATT CTTGACCGCG CGGCACAATT CGGCGCGCTT
GAAACCGTGA TCATCGCCCA GGGCGGTCAT ACTCTGGCCG AGCGCGGGTA TCATGGTCAT
TCCCCGGGGG CGCCGACCAA TATCAAATCG GCCTCGAAAT CGGTGATGTC GGCTTTGGTC
GGCATCGCCA TCGACAAGGG CGTGCTAAGC GGCACCGATC AGAAAATCGC CCCGCTGCTC
GCCGGCGATC TGCCCGCCGA TCCCGACCCG CGACTGGCCG AGATCACCAT TGGCAATCTT
TTATCGATGC AGGCTGGTCT GGGCCGCACC TCCGGTCCCT TTTACGGGCG CTGGGTCGCC
AGCGCCAATT GGGTGCGCGC CGCCCTGGCC CGGCCCTTCG CCGATGATCC GGGGGGGCGG
ATGCTTTATT CCACCGGATC GAGCCACCTG CTTTCGGCCA TCCTGACGCG GACCACCGGG
CGTTCGACCC TGGCCCTGGC CCGGGATTGG CTAGGCGCCC AGCCGGGCTT TGCCGTATCC
GGCTGGGATC GCGACCCCCA GGGGATCTAT TTCGGCGGCA ATCAGATGGC GATGAGCCCG
CGCGCCCTGC TGGCCTTTGG CGAGCTTTAC CGGACGCGGG GCAAAACCGC CGAGGGCCGT
CACGTGATCC CGGCCGCTTG GATCGACCAG TCGTGGACTT GGCGGACGCG ATCGGAATTC
ACCGGCGATG GCTATGGTTA TGGTTGGTTC CTGCGGCCGA TCTCCGGCGA GGAGGTGCGC
TATGCCTGGG GCTACGGCGG GCAGATGCTT TACCTCGTGC CGTCGCTGGA CCTCACCGTC
GTCATGACTT CGGATGAGAC CAGCCCGTCG GCGCGGAGCG GTCATCGCGA CACTCTTCAC
GGCCTGCTGG CCGAGATCAT CGGGGCGCTG CGGGCCGAGG ATCCCCTCGC ACGGTAA
 
Protein sequence
MTRSLILLCA VFWLIAAPAD ARTMPELERI LDRAAQFGAL ETVIIAQGGH TLAERGYHGH 
SPGAPTNIKS ASKSVMSALV GIAIDKGVLS GTDQKIAPLL AGDLPADPDP RLAEITIGNL
LSMQAGLGRT SGPFYGRWVA SANWVRAALA RPFADDPGGR MLYSTGSSHL LSAILTRTTG
RSTLALARDW LGAQPGFAVS GWDRDPQGIY FGGNQMAMSP RALLAFGELY RTRGKTAEGR
HVIPAAWIDQ SWTWRTRSEF TGDGYGYGWF LRPISGEEVR YAWGYGGQML YLVPSLDLTV
VMTSDETSPS ARSGHRDTLH GLLAEIIGAL RAEDPLAR