Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1232 |
Symbol | |
ID | 3833730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 1454447 |
End bp | 1455769 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637825321 |
Product | C-terminal processing peptidase S41A |
Protein accession | YP_426320 |
Protein GI | 83592568 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00731341 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTGGA AGACTTGGAT CTCGGCCAGC GCGATCGCCT TCACGGCGTT CACGGCTGGA CAGCTTTATC ATACCGAACA GGCCGAGGCG GCCCGGGGAG AGGAGACCTA TCAGCTTCTC GACCTGTTCG CCGACGTTTT CGAGCGGGTC AAACGCGACT ATGTCGAGGA AGTTGGCGAT GACCAACTGA TCGAAGCCGC GATCAACGGC ATGCTGACCT CGCTCGATCC CCACTCCAGT TACCTGAACG CCAAGCACTT CGAGGACATG CAGGTCCAGA CCAAGGGCGA ATTCGGCGGC CTTGGCATTG AAGTGACCCA GGAGGACGGG TTTATCAAGG TGGTCTCGCC GATCGACGAG ACCCCCGCCG CCCTGGCCGG ACTGCAGCCC GGCGATTTCA TCACCCATCT CGACGGCGAA AGCGTTCTTG GGCTGTCGCT GGCCGATGCG GTGGAAAAGA TGCGCGGCCC GGTGGGCAAG GAAATCCGCC TCACCATTCA GCGGGTGGGC AAGGAACCCT TCGACGTCAC CCTCAAGCGC GACACCATCA AGATCCAGTC GGTCAAATCC CGCATGGAAG GCGATGTCGG CTATGTCCGC ATCACCAGCT TCTCCGAGCA GACCGAGAAA TCCCTGCGCG AGGCGCTCGA CGATCTGCGC TCCAAGGGCG GGGACTCGAT CAAGGGCTAT GTGCTTGATC TGCGCAACAA CCCCGGTGGC CTGCTGGAAC AGGCGATCGC CGTGTCCGAT GTCTTCCTCG ACAAGGGCGA GATCGTCTCG ACCCGCGCCC GCGACGCCAA GGACACCCAG CGCTTCAACG CCCGGCCGGG TGATCTGACC AAGGGCATGC CCGTGGTCGT TCTGATCAAC AGCGGGTCGG CCTCGGCCAG CGAAATCGTC GCCGGCGCCT TGCAAGATCA TCATCGGGCG CTGATCGTCG GCACCAAGTC CTTTGGCAAG GGCTCGGTCC AGACCATCAT GCCGCTGCCC GGCCATGGCG CCATGCGCCT GACCACGGCC CGCTACTACA CGCCGTCCGG GCGCTCCATC CAGGCGCTGG GCATCGATCC CGACATCCAG GTCGAACCCG CCCGGATCGA GGCGATCAGC GCCCAGAACG AGATGCGCAG CGAAGCCGAA CTGCGCAACG CCTTGAAGAA CGACACCCTC AAGCCGAGCC TGGGGGTCAA GCCGGCCAAT GGTCTGCCGC CCAGTCAGGT TCGCAACGAC CAGACTCCGC AGGCCGATAC CGACTATCAG CTCGCCCGCG CCGTGGATCT GATCCGCGGT CTGGCGATCT ATCGCTCCAA GTCCATCCAG TAA
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Protein sequence | MTWKTWISAS AIAFTAFTAG QLYHTEQAEA ARGEETYQLL DLFADVFERV KRDYVEEVGD DQLIEAAING MLTSLDPHSS YLNAKHFEDM QVQTKGEFGG LGIEVTQEDG FIKVVSPIDE TPAALAGLQP GDFITHLDGE SVLGLSLADA VEKMRGPVGK EIRLTIQRVG KEPFDVTLKR DTIKIQSVKS RMEGDVGYVR ITSFSEQTEK SLREALDDLR SKGGDSIKGY VLDLRNNPGG LLEQAIAVSD VFLDKGEIVS TRARDAKDTQ RFNARPGDLT KGMPVVVLIN SGSASASEIV AGALQDHHRA LIVGTKSFGK GSVQTIMPLP GHGAMRLTTA RYYTPSGRSI QALGIDPDIQ VEPARIEAIS AQNEMRSEAE LRNALKNDTL KPSLGVKPAN GLPPSQVRND QTPQADTDYQ LARAVDLIRG LAIYRSKSIQ
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