| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1210 |
|---|
| Symbol | |
|---|
| ID | 3833708 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 1427956 |
|---|
| End bp | 1428912 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637825299 |
|---|
| Product | malate dehydrogenase |
|---|
| Protein accession | YP_426298 |
|---|
| Protein GI | 83592546 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0039] Malate/lactate dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01763] malate dehydrogenase, NAD-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.771205 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGCA AGAAGATCGC CCTTGTCGGC GCCGGCAATA TCGGTGGCAC GCTTGCCCAT
CTCATCGGTC TCAAGGAATT GGGCGATGTG GTGCTCTTCG ACATCGCCGA GGGGACTCCT
CAGGGCAAGG CTCTGGATAT CGCCGAATCC ACCCCGATCG AAGGGGTCGA CGCCAGCTAC
TCGGGGTCCA ACGATTACGC CGCGATCAAG GACGCCGATG TGGTGATCGT CACCGCCGGC
GTGCCGCGCA AGCCGGGCAT GAGCCGCGAC GACCTGATCG GCATCAACGC CAAGGTGATG
TCGGCCGTCG GCCAGGGCAT CCGCGCCAAT TGCCCCAACG CCTTCGTCAT CTGCATCACC
AACCCGCTCG ACGCCATGGT CTGGGTGTTG CGCGAGGTTT CGGGGCTGCC CCACAACAAG
GTGGTCGGCA TGGCCGGCGT GCTCGACAGC GCCCGCTTCC GCTATTTCCT GTCCGAGGAA
TTCAATGTCT CGGTCAAGGA CGTCAACGCC TTCGTGCTCG GCGGCCACGG CGACACCATG
GTTCCGCTGC CGCGCTATTC GACCGTCGCC GGTATTCCGC TGCCCGATCT GGTGAAGATG
GGCTGGACCA CCCAGGAGAA GCTCGACCAG ATCATCCAGC GCACCCGCGA CGGTGGCGCC
GAGATCGTCG GCCTGCTCAA GACCGGATCG GCCTTCTATG CCCCGGCCGC CGCCGCCGTG
CAGATGGCCG AAGCCTATCT CAAGGACCAG AAGCGCGTTC TGCCCTGCGC CGCCTGGGTT
GAGGGCCAGT ATGGTCTGGA CGGCATCTAT GTCGGCGTCC CCACCATCAT CGGCGCCGGC
GGCATCGAGA AGGTGATCGA GATCGAACTG AACGCCGACG AAAAGGCGGC GTTCGCCAAA
TCCGTCGACA GCGTGCGCGG GCTGATCGCC GCGTCGAAGG AACTGATGCC GAAATAA
|
|---|
| Protein sequence | MARKKIALVG AGNIGGTLAH LIGLKELGDV VLFDIAEGTP QGKALDIAES TPIEGVDASY
SGSNDYAAIK DADVVIVTAG VPRKPGMSRD DLIGINAKVM SAVGQGIRAN CPNAFVICIT
NPLDAMVWVL REVSGLPHNK VVGMAGVLDS ARFRYFLSEE FNVSVKDVNA FVLGGHGDTM
VPLPRYSTVA GIPLPDLVKM GWTTQEKLDQ IIQRTRDGGA EIVGLLKTGS AFYAPAAAAV
QMAEAYLKDQ KRVLPCAAWV EGQYGLDGIY VGVPTIIGAG GIEKVIEIEL NADEKAAFAK
SVDSVRGLIA ASKELMPK
|
|---|
| |