Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1136 |
Symbol | |
ID | 3833443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 1340976 |
End bp | 1342007 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637825225 |
Product | periplasmic binding protein |
Protein accession | YP_426224 |
Protein GI | 83592472 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0792044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCTTCAC CCATGCGCTT GTCTTTTCTC GCCGCGGCTT TCGCCGCCCC CCTCGTCGTC TCGGCCTCCG GCGCCGGCGC CGCCGAGCCT ACCCGCTATC CCCTGACGCT CCAGACCTGC GGCCAGACCA TCACCTTTGA TCGGGCGCCC AGCCGCGTCG TTTCGATCGG CCAGAGTTCC ACCGAGATCC TCTATCTTCT GGGCTTGGCC GATAAGGTCG TTGGCACGGC GTTGTGGGTC GGTCCCGTGA TCGCCGGCTA TGAGGCGGTC GACGCCAAGG TCCCGCGCCT GGCCGACAAC GACCCGAGCT TTGAAAGCGT CGTCGGCAAG AAACCCGATC TCGTCACCAA TCAATACCAA TGGCAGGTCG GCCCCAAAGG GGTGGTGGCG ACAAACGCCC AGTTCGCCGA ACTGAAGATC CCCGTCTACA CCTCTCCGGC CGATTGCGTC GGCAAGGATA ATTCCGAAGG GGGCGACGGT CTGCGCACGA GCCGTTTCAC CACGGATCTG ATCTATCAGG AGATCGAGGA CCTAGCCCGC ATCTTCGATG TCAGCGAGCG CGGTGAAGTT TTGATCAACG ATTTGAAGGC CCGCGAGGCG GCGGCGAAGA AAAAAATCGC TTCTCTCCGC AGCCCGGTTT CCGCCGTCTT CTGGTTTTCA AGCGCCGATC TCGACATCGA TCCCTATGTC GCCGGTAGCG ACGGTGCCCC CGGATACATC CTGTCCGTTC TGGGCATCAC CAATGTGATC AAAAGCGAGG AGGAATGGCC GACGGTTGGT TGGGAGACCA TCGCCAAGGC CAATCCGACG ATCATCGTCG CCGGTGAAAT GACCCGGCGG CGCTTTCCGG TCGATGATAT CGCCGTGAAG AAGACCTTCC TGGCCAATGA TCCGGTCACC CGCCTGATGC CCGCCGTCCA GGAGGGCCGT ATCGTGCCCC TTGACGCCCA GGCGATGAAC CCGACCATCC GCACCATCGA GGGCATCGAG GTCGTGGCCG ATGCGGTCAT CAAGGCCGGC CTCGCCCAAT GA
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Protein sequence | MSSPMRLSFL AAAFAAPLVV SASGAGAAEP TRYPLTLQTC GQTITFDRAP SRVVSIGQSS TEILYLLGLA DKVVGTALWV GPVIAGYEAV DAKVPRLADN DPSFESVVGK KPDLVTNQYQ WQVGPKGVVA TNAQFAELKI PVYTSPADCV GKDNSEGGDG LRTSRFTTDL IYQEIEDLAR IFDVSERGEV LINDLKAREA AAKKKIASLR SPVSAVFWFS SADLDIDPYV AGSDGAPGYI LSVLGITNVI KSEEEWPTVG WETIAKANPT IIVAGEMTRR RFPVDDIAVK KTFLANDPVT RLMPAVQEGR IVPLDAQAMN PTIRTIEGIE VVADAVIKAG LAQ
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