Gene Rru_A1136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1136 
Symbol 
ID3833443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1340976 
End bp1342007 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content62% 
IMG OID637825225 
Productperiplasmic binding protein 
Protein accessionYP_426224 
Protein GI83592472 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0792044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTTCAC CCATGCGCTT GTCTTTTCTC GCCGCGGCTT TCGCCGCCCC CCTCGTCGTC 
TCGGCCTCCG GCGCCGGCGC CGCCGAGCCT ACCCGCTATC CCCTGACGCT CCAGACCTGC
GGCCAGACCA TCACCTTTGA TCGGGCGCCC AGCCGCGTCG TTTCGATCGG CCAGAGTTCC
ACCGAGATCC TCTATCTTCT GGGCTTGGCC GATAAGGTCG TTGGCACGGC GTTGTGGGTC
GGTCCCGTGA TCGCCGGCTA TGAGGCGGTC GACGCCAAGG TCCCGCGCCT GGCCGACAAC
GACCCGAGCT TTGAAAGCGT CGTCGGCAAG AAACCCGATC TCGTCACCAA TCAATACCAA
TGGCAGGTCG GCCCCAAAGG GGTGGTGGCG ACAAACGCCC AGTTCGCCGA ACTGAAGATC
CCCGTCTACA CCTCTCCGGC CGATTGCGTC GGCAAGGATA ATTCCGAAGG GGGCGACGGT
CTGCGCACGA GCCGTTTCAC CACGGATCTG ATCTATCAGG AGATCGAGGA CCTAGCCCGC
ATCTTCGATG TCAGCGAGCG CGGTGAAGTT TTGATCAACG ATTTGAAGGC CCGCGAGGCG
GCGGCGAAGA AAAAAATCGC TTCTCTCCGC AGCCCGGTTT CCGCCGTCTT CTGGTTTTCA
AGCGCCGATC TCGACATCGA TCCCTATGTC GCCGGTAGCG ACGGTGCCCC CGGATACATC
CTGTCCGTTC TGGGCATCAC CAATGTGATC AAAAGCGAGG AGGAATGGCC GACGGTTGGT
TGGGAGACCA TCGCCAAGGC CAATCCGACG ATCATCGTCG CCGGTGAAAT GACCCGGCGG
CGCTTTCCGG TCGATGATAT CGCCGTGAAG AAGACCTTCC TGGCCAATGA TCCGGTCACC
CGCCTGATGC CCGCCGTCCA GGAGGGCCGT ATCGTGCCCC TTGACGCCCA GGCGATGAAC
CCGACCATCC GCACCATCGA GGGCATCGAG GTCGTGGCCG ATGCGGTCAT CAAGGCCGGC
CTCGCCCAAT GA
 
Protein sequence
MSSPMRLSFL AAAFAAPLVV SASGAGAAEP TRYPLTLQTC GQTITFDRAP SRVVSIGQSS 
TEILYLLGLA DKVVGTALWV GPVIAGYEAV DAKVPRLADN DPSFESVVGK KPDLVTNQYQ
WQVGPKGVVA TNAQFAELKI PVYTSPADCV GKDNSEGGDG LRTSRFTTDL IYQEIEDLAR
IFDVSERGEV LINDLKAREA AAKKKIASLR SPVSAVFWFS SADLDIDPYV AGSDGAPGYI
LSVLGITNVI KSEEEWPTVG WETIAKANPT IIVAGEMTRR RFPVDDIAVK KTFLANDPVT
RLMPAVQEGR IVPLDAQAMN PTIRTIEGIE VVADAVIKAG LAQ