Gene Rru_A1131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1131 
Symbol 
ID3833438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp1332809 
End bp1333675 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content68% 
IMG OID637825220 
Productbranched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase 
Protein accessionYP_426219 
Protein GI83592467 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.554453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCC GGCGACCGGC CGTCATTTGG CTGAACGACC GGCTCGTGCC CGCCGCAAAG 
GCCCGCATCG ATCCCGCCGA TCGCGGATTT CTGCTTGGCG ATGGCCTATT CGAAACCATC 
CCGGCGCGCG ACGGCCGCCC CCTGCGTCTG GCCGCCCACC TCGCCCGCCT GGGGCGCGGC 
GCCCGAATTT TAGGCATTCC CCTACCCGCC CTGGATATCG CCGCCGCCTT GGCCGCCACC 
CTGGCGGCCA ACGACCTGAG CGAGGGGGTG CTGCGCCTGA CCCTGACCCG GGGTCCCGGG 
CCGCGCGGCC TGTTGCCGCC GCCCGCGCCA AAGCCCACGA TCATGATCAC GGCGACGGCC 
TTTCCGCCGC CAACGGGGCC GGCGCGGCTG ATCGTGGCGA CGCGGACAAG GCGCAACGAG 
GCCTCGCCGC TGTCGACGAT CAAATATCTT GCCTATGGCG ACGCCATCCT CGCCCGCCAG 
GAGGCCGCCG AGCGCGGCGC CGATGACGCG ATCTTGCTCA ACCTCGGGGG TCGGGTCGCC 
GAAACCACCG TCGCCACGCT GTTCATCGTC CAGGGCGGGC GGCTTCTCAC CCCTCCGCAG 
ACCGACGGCG CCCTGCCCGG CATTCTTCGC GCCGAGATGC TGGCCTGGGG AGCGCGCGAA 
CACTCGCTGA CCCCCGCCGA TCTTTTGACC GCCGACGGCG TTTTTCTGGC CAACAGCCTT 
GGGTTCCGCT TGGTCATTTC CATTGACGGA CAGGCCGTTC CCGATTGCAC ACCCCTTGTT 
CATGACCTTC AAGGCTATGT AAGACAAAGG GAAAATGGCA CCTCACCGGA AGAGCCCTCT 
GATGGGGGAA GCCCCTTCCC GAAATAA
 
Protein sequence
MTARRPAVIW LNDRLVPAAK ARIDPADRGF LLGDGLFETI PARDGRPLRL AAHLARLGRG 
ARILGIPLPA LDIAAALAAT LAANDLSEGV LRLTLTRGPG PRGLLPPPAP KPTIMITATA 
FPPPTGPARL IVATRTRRNE ASPLSTIKYL AYGDAILARQ EAAERGADDA ILLNLGGRVA 
ETTVATLFIV QGGRLLTPPQ TDGALPGILR AEMLAWGARE HSLTPADLLT ADGVFLANSL 
GFRLVISIDG QAVPDCTPLV HDLQGYVRQR ENGTSPEEPS DGGSPFPK