Gene Rru_A1090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1090 
Symbol 
ID3833397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1279658 
End bp1280107 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content65% 
IMG OID637825179 
Product4-hydroxybenzoyl-CoA thioesterase 
Protein accessionYP_426178 
Protein GI83592426 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAGT CCTTGACGCC GACCAGCGGC CTCTGGCGCC AGGGGTGCCA CTTGTTGCCC 
GTGCGCGTGC ATTGGGAAAA CACCGATGCC GGGGGTATCG TCTACCACGC CGAATACCTG
AAGTTCGCCG AGCGGGCGCG CACCGAGATG CTGCGACTGG CCGGAATTCA CCAGGGATCG
ATGCTGGCGG GCGAGGGGGT GGGCTTCGCC GTGGCGAAGC TGTCGATCGA CTACAAGCGT
CCGGCCAAGC TGGACGACGC CCTGGTGGTG GAAACCACGC TCGATGCCGT TGGCGGCGCC
GTGCTCGATC TCACCCAGAC TATCCGCCGC GAGGGTGATC CTCTGGCGAT CTTGAAGGTG
CGCGTGGCCT GTCTGTCGCT GAAGGCCGGC GTTCCCATCC GCATTCCCGC CATCATGCGG
GAGAAACTTG TACCAGGAAA CGGCGACTGA
 
Protein sequence
MTQSLTPTSG LWRQGCHLLP VRVHWENTDA GGIVYHAEYL KFAERARTEM LRLAGIHQGS 
MLAGEGVGFA VAKLSIDYKR PAKLDDALVV ETTLDAVGGA VLDLTQTIRR EGDPLAILKV
RVACLSLKAG VPIRIPAIMR EKLVPGNGD