Gene Rru_A0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0870 
Symbol 
ID3834347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp1041568 
End bp1042230 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content62% 
IMG OID637824958 
ProductOmpA/MotB 
Protein accessionYP_425958 
Protein GI83592206 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA CCGCCACCCG GATCGTTAAG CTCGTTGGCT TTTCTCTTGT CGTGGCGACG 
CCCCCTTCCA CGGTCAAAGC GGAAGACGTG CTTTTATATC GCAGCGTTCC CAGCGTCGAT 
GAATTGCGCG ATGTCTTGGT CCATTCCCAA AAGCCCCTCA GCAAGGCCAT CGTTTTTAGC 
ACCCCGTCCG AGGACGCTTC CCCGCAAACG GCACCCGCCG CCGCCCCGGC GGCGGCGTCT 
TCGACAAGCA AACCCGGCCG TCCTCCGGCC GTTCCCGCCA GCGCGGCTCA TCACGCCCTC 
CCGGCGGCGG CAAGCGACAC CCCAAAGCGC AAAACAGTGG GCCTCCCCAT CCTGTTTGAA 
ATCAACTCGG CGGAAATCCT GGTCAAATCC TTGCCCTATC TCAACCAGAT CGGGACCCTT 
CTTCGCGAGG AAAGCGCCCT GATCTTGGTC ATCGAAGGGC ATACCGACGC CAACGGACCC 
TCCGACTATA ATCTCGCCCT TTCCCGGAAA CGGGCGGAGG CGGTCGCCGA CTATCTCATC 
GGGTCTTTCG CTATCCCCCC CGCGCGCCTC AGAACCGAGG GAAAAGGCGA AAGCGCCCTC 
TTGCGGCCCT CGTCCCCCAC CCATCCCGAC AATCGGAGAG TCCAGTTCTA CGCCGGAAGC 
TGA
 
Protein sequence
MKKTATRIVK LVGFSLVVAT PPSTVKAEDV LLYRSVPSVD ELRDVLVHSQ KPLSKAIVFS 
TPSEDASPQT APAAAPAAAS STSKPGRPPA VPASAAHHAL PAAASDTPKR KTVGLPILFE 
INSAEILVKS LPYLNQIGTL LREESALILV IEGHTDANGP SDYNLALSRK RAEAVADYLI 
GSFAIPPARL RTEGKGESAL LRPSSPTHPD NRRVQFYAGS