Gene Rru_A0868 details

Gene Information

• Locus tag: Rru_A0868
• ID: 3834345
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: -
• Start bp: 1037228
• End bp: 1040548
• Gene Length: 3321 bp
• Protein Length: 1106 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637824956
• Product: peptidase C14, caspase catalytic subunit p20
• Protein accession: YP_425956
• Protein GI: 83592204
• COG category: [R] General function prediction only
• COG ID: [COG2319] FOG: WD40 repeat

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGAGGG GGTCACAAAC AGCGTCCGGC CGGCTTGGCG AAGGGAAGAC GCTTGGACAG 
GGAAGGATGC GATGGGTAGC CCTGACCCTG CTGTTTTTGT CGTTCTTGGC GACGGCGCAC 
GGCGCGCGAT GCCAGGAGAG CGGTCTGCCG GACCAGCCTT TTTTACGCTT CGAGACCGGG 
ATGCACACGG CGCCGGTGAC CGATCTGGCG GTTGGCGCCG CGGGCACCCT GATCGCCACG 
GCCTCGCTTG ATAAAAGCCT GCGCCTTTGG GACGGACAGA GCGGGCGCCT TTTGGGCGGC 
GTTCCCGTGC CCCAAGGGGA CGGGCTCGAA GGAAGCCTTT ATACGGTGAG CCTGTCTCCC 
GATGGGAGCA AGGCCCTGGT GGCGGGGTAC ACGGCGCAAA GCTGGGATGG CAGCCCCTCC 
CTTTACCTGA TCGACGTGAA GGCCCAGAAG CTCCAATTCC GCATCAAAGG CCTGCCCGCC 
GTCGTCACCA GTTTGCGGCA CCGCTCCGAC GGCAAGGTCT TCGCCGCCGG TTTCGCCGCC 
GGGGCCGGTA TCCGCGTGTG GGACGCGCTG ACCGGCCGGA CCCTGGCCGA GGACAAGGCC 
TTTCAGGACG CCACCGTGTC TTCCCTGGCC TTCGCCGCCG ACGGCCGGCT TGCCGTCTCC 
AGTTCCGACG GCTTTGTGCG TTTATACGCC GCGGATTTCC GCCTTTTGGC CCGTGTTTCC 
GTCAGAAAAA CCGGAACGCC CTTCGGTTTG GCTTTTTCCC CCGATGGTCG AACCCTCGCC 
ATAGGATATC GCTCGGCGGC CCTTGTGGAC CTGCGCGACG GCCTGACCCT GGCCGCCGGC 
ACCATCCTTT CCGTACCGCC CGGCGAGACG GGGGAAACTC CCCTTGTCAC CTGGACGACC 
GTGGCCGGCG AGAGCGTTCT CGTCGCCGGC GGCACCCGCG CCGACACCGA CCAGCGAACT 
CTTTTGCTTG CCTACGCCCC CCAAAAGCGC AAGTGGTCGG TCCTTGGAAC GGTGGGACAC 
GACACGGTGA CGGCTCTCGC CCCCCATCCG GACGGGGGCG TCGTGTATGG AACGGCCGAT 
CCGTCTTGGG GAATGATGGG GAGGGGAACG GCCGAGGCGC CGCTGCCGGC CATCCACCAC 
GAGGCCGGCA TCGCCGATTT CCGCGATGTC GCCTCCGGCT TTTTCGCCGT GACCCCCGAA 
GGGACCCTCC TGGAGGTCGG TATCGCCAAG GGAGGACAGA CGCCCTGGAC GATCGATCTT 
TCCCGGGGCT TGGTTCGCCC GGGGCCGGCC GGACAAGAGA CCGTTCGCGC CACGGCCAGC 
CCCGGTCTGG CTGACTGGCG CAACGGCCGC GCCCCCCTTC TGGGGAAAAT CCCCCTGGTC 
CTCGAGCCGG CGGAGACGGC CCGTAGCCAA GCTTTGCTTC CCGATGGCAA GCGCTTCATC 
CTTGGCGCCG AATTCTCCCT GCGTCTATAC GACGAGACCG GACGCCTGCT TGACCGCCTG 
ATCACCCCCG CCCCGGTCTG GGGGGTTCTT CCCGTTCCAA ACCTCCCCCT CGTCGTTGCC 
GCCCTGGGGG ACGGAACCCT GCGTTGGTAT CATGTTACCT TGGAAAACGG GCTGCGCGAG 
CAAGGCGCCT TTTTCCTTCA CCCCGCCTCC AACCGCTGGG TGGCCTGGAC GCCGGAGGGC 
TTTTTCGCCC ATTCCGACAG TGGCGGGCAG ACCATGGTGG GCTACCTGTT CAACGTGGCC 
AAAGCGCAAT CCCCGACCTT GGTGGATTTC GCCCAGATGT ATCGTCTGTT CCATAAGCCG 
GGTCTGGTCT GGCCGGCGTT GATCGATCCG ATCGGCGCGC GGCGGGGACT GGATCTCGCG 
CTCGCCCAGA TCGGAGATAT CCGCTCGGTT CTGGGGATGG CGCCGCCCCC CTCCGTCGCC 
CTGGCGCAGG TCTGCCCCAA GGAAAACACC CCCGTCACCC GCGGCTTTCA TGTGATTGAG 
ACCACCCCGC CCCCGCCATC GGTGGGCGGG AGCGACGAGA CCGACCCTTG TTTCGCCCCC 
GCCGCCCTAG CCCGCCAAGC GGGTTCGTCC GATGCGATTC ACGGCAAGGA CGCGGCGGTT 
CTTTCGGTCA TGACCCTGGC TTCGACCCAA AAGGAGGTGG CTTTGCGGTT TGATGTCGAG 
GATCGCGGCG GCGGCCTGGA ACTGGTCGAC GTTCTGGTCA ACGGGCTCAA CGTGGGGCGG 
AAGCGGGCTT TCGAAAAGCG GGTCGCCGCC CCCCCTTCGC CGCCTTCGGC TTCGGCGCCT 
TCGGCCGCGC CCCCGTCCGT CGCCGAGCCG TCCGCTGCCT CCTCCCCCAA GACCACGGCC 
ATCGCGGCGG CCATCGCCCC CGCGCAGCCG GCGGACCCCG CGCAGACAGC GGATACGGAA 
GACTTTCCCT TCCCCGCGCC CCCCTTGAGA TTCGAGCGGG CCGTCACCCT GAATGAGGGG 
ATCAACCGGG TCGAGATCCG GGCCTATGGA CAAAACGGGG TCTACGGCCG CACGGCTTTT 
GATCTCGTGG TCCCGCCCCC ACCGCTGGAG AAGGCCCCTC CCTCACCAGC CCCCGCCCCC 
CACAGCCGAC TTGTCGTGCT GGCCGTTGGC ATCAACGACT ATGCCGGCGC CAGCAATGAT 
CTCCAATATG CCGTAGCCGA CGCCAGAACC TTCGCGACCA CCGTTCGGCG TCAAGCGCTG 
GGCGTTTATG AGGAGATCCG GGTTATCGAG CTTTATGATG CCCAGGCCGA GCGTCCCGCC 
CTGGAAGCCC ATTTGGCCCA GCTCGCCGAT GAAACCCGGC CCGAGGACAG CCTGCTTCTT 
TATTTCTCCG GACATGGCGA GGTCGACGAA CAGGGACTCT ATCGCTTCCT GACCCCGCTC 
GCCTATACCA CGCCCGAGGA GCGCGGGCTT GACGCGAACC GTTTGGTGGA GTTGCTCGGC 
GATATTCCGG CGCAACGCAA AATGTTGTTC CTCGATACCT GTCACTCCGG CGCTTTCGAC 
ATTGAAGAGG TTTCGGGAAA CCTGTTCAAC GAAACGGGGC AATTCATCCT GTCCGCGGCC 
GAGGCCTCGG AAACCGCCGC GGATGTGCTG CCCGGCACCC AAAACGGGGT ATTCGCGGTC 
GCCGTCATGC AAGGCTTGGA ACGCGATGCC GCCCTGCGCA GCGGAACCAC CGTAAGCGCC 
CTCACCTTGG GGGAATGGGT CCGCCTGCGG GTGCCCGTCC TGGCGCAAGA ACGCCGCCTG 
GGCGCCCAAC ACGCCGTGTT CAAGGGCAAT AACACCATGG CCTTTCCCCT CACCCATATC 
CTGGAAGAGC CACAACCATG A 

 

Protein sequence

MQRGSQTASG RLGEGKTLGQ GRMRWVALTL LFLSFLATAH GARCQESGLP DQPFLRFETG 
MHTAPVTDLA VGAAGTLIAT ASLDKSLRLW DGQSGRLLGG VPVPQGDGLE GSLYTVSLSP 
DGSKALVAGY TAQSWDGSPS LYLIDVKAQK LQFRIKGLPA VVTSLRHRSD GKVFAAGFAA 
GAGIRVWDAL TGRTLAEDKA FQDATVSSLA FAADGRLAVS SSDGFVRLYA ADFRLLARVS 
VRKTGTPFGL AFSPDGRTLA IGYRSAALVD LRDGLTLAAG TILSVPPGET GETPLVTWTT 
VAGESVLVAG GTRADTDQRT LLLAYAPQKR KWSVLGTVGH DTVTALAPHP DGGVVYGTAD 
PSWGMMGRGT AEAPLPAIHH EAGIADFRDV ASGFFAVTPE GTLLEVGIAK GGQTPWTIDL 
SRGLVRPGPA GQETVRATAS PGLADWRNGR APLLGKIPLV LEPAETARSQ ALLPDGKRFI 
LGAEFSLRLY DETGRLLDRL ITPAPVWGVL PVPNLPLVVA ALGDGTLRWY HVTLENGLRE 
QGAFFLHPAS NRWVAWTPEG FFAHSDSGGQ TMVGYLFNVA KAQSPTLVDF AQMYRLFHKP 
GLVWPALIDP IGARRGLDLA LAQIGDIRSV LGMAPPPSVA LAQVCPKENT PVTRGFHVIE 
TTPPPPSVGG SDETDPCFAP AALARQAGSS DAIHGKDAAV LSVMTLASTQ KEVALRFDVE 
DRGGGLELVD VLVNGLNVGR KRAFEKRVAA PPSPPSASAP SAAPPSVAEP SAASSPKTTA 
IAAAIAPAQP ADPAQTADTE DFPFPAPPLR FERAVTLNEG INRVEIRAYG QNGVYGRTAF 
DLVVPPPPLE KAPPSPAPAP HSRLVVLAVG INDYAGASND LQYAVADART FATTVRRQAL 
GVYEEIRVIE LYDAQAERPA LEAHLAQLAD ETRPEDSLLL YFSGHGEVDE QGLYRFLTPL 
AYTTPEERGL DANRLVELLG DIPAQRKMLF LDTCHSGAFD IEEVSGNLFN ETGQFILSAA 
EASETAADVL PGTQNGVFAV AVMQGLERDA ALRSGTTVSA LTLGEWVRLR VPVLAQERRL 
GAQHAVFKGN NTMAFPLTHI LEEPQP